Sequence 1: | NP_001185767.1 | Gene: | RBM12 / 10137 | HGNCID: | 9898 | Length: | 932 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_647626.1 | Gene: | CG7879 / 38184 | FlyBaseID: | FBgn0035235 | Length: | 985 | Species: | Drosophila melanogaster |
Alignment Length: | 1133 | Identity: | 239/1133 - (21%) |
---|---|---|---|
Similarity: | 386/1133 - (34%) | Gaps: | 355/1133 - (31%) |
- Green bases have known domain annotations that are detailed below.
Human 1 MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRTGGTIK 65
Human 66 GSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSNFNNPS 130
Human 131 ----PSVVTATTSVHESN-KNIQTFSTASVGTAPPNMGASFGSPTFSSTVPSTASP--------- 181
Human 182 ----------------MNTVPPPPIPPIPAMPSLP-PMPSIPPIPVPPPVPTLPPVP-------- 221
Human 222 -PVPPIPPVPSVPPMTPLPPMSGMPPLNPPP-----VAPLPAGMNGSGAPMN-LNNNLNPMFLGP 279
Human 280 LNPVNPI-------------QMNSQSSVKPL-----------PINPDDLYVSVHGMPFSAMENDV 320
Human 321 RDFFHGLRV--DAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV 383
Human 384 AAGGHITFKQNMGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG------------------F 430
Human 431 CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL-CRHKQY 494
Human 495 MGNRFIQVHPITKKGM---LEKIDMIRKRLQNFSYDQREMILNPE-------------------- 536
Human 537 GD---------------------------------VNSAKVCAH--------ITNIPFSIT---- 556
Human 557 --------------------------KMDV------------------LQFLEGIPVDENAVHVL 577
Human 578 VDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKM 641
Human 642 PVPGNPAVPGMPNAGLPGVGLPSAGLPGAGLPSTGLPGSAITSAGLPGAGMPSAGIPSAGGEEHA 706
Human 707 FLTVGSKEANNGPPFNFPGNFGGSNAFGPPIPPPGLGGGAFGDARPGMPSVGNSGLPGLGLDVPG 771
Human 772 FGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPGPGPGPG 836
Human 837 PIHIGGPPGFASSSGKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAM 901
Human 902 VAFESRDEATAAVIDLNDRPIGSRKVKL 929 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RBM12 | NP_001185767.1 | RRM1_RBM12 | 1..92 | CDD:241189 | 51/90 (57%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 96..116 | 3/19 (16%) | |||
RRM2_RBM12 | 303..377 | CDD:241191 | 15/75 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 392..424 | 6/31 (19%) | |||
RRM3_RBM12 | 421..521 | CDD:240956 | 27/121 (22%) | ||
RRM4_RBM12 | 545..632 | CDD:241193 | 20/143 (14%) | ||
Sporozoite_P67 | <633..>764 | CDD:253298 | 21/130 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 717..853 | 25/135 (19%) | |||
RRM5_RBM12 | 855..929 | CDD:241195 | 25/73 (34%) | ||
CG7879 | NP_647626.1 | RRM1_RBM12_like | 2..75 | CDD:240954 | 42/72 (58%) |
RRM_hnRNPH_ESRPs_RBM12_like | 355..425 | CDD:240700 | 15/70 (21%) | ||
RRM | <364..551 | CDD:223796 | 42/211 (20%) | ||
RRM_SF | 478..549 | CDD:240668 | 19/71 (27%) | ||
RRM_SF | 702..773 | CDD:240668 | 12/72 (17%) | ||
RRM_hnRNPH_ESRPs_RBM12_like | 910..982 | CDD:240700 | 25/71 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4307 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 200 | 1.000 | Inparanoid score | I3782 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001433 | |
OrthoInspector | 1 | 1.000 | - | - | otm40887 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_112833 | |
Panther | 1 | 1.100 | - | - | O | PTHR13976 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X6068 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.910 |