| Sequence 1: | NP_004924.1 | Gene: | CDH15 / 1013 | HGNCID: | 1754 | Length: | 814 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_997496.1 | Gene: | Cdh15 / 361432 | RGDID: | 1303000 | Length: | 784 | Species: | Rattus norvegicus |
| Alignment Length: | 786 | Identity: | 672/786 - (85%) |
|---|---|---|---|
| Similarity: | 710/786 - (90%) | Gaps: | 5/786 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MDAAFLLVLGLLAQSLCLSLGVPGWRRPTTLYPWRRAPALSRVRRAWVIPPISVSENHKRLPYPL 65
Human 66 VQIKSDKQQLGSVIYSIQGPGVDEEPRGVFSIDKFTGKVFLNAMLDREKTDRFRLRAFALDLGGS 130
Human 131 TLEDPTDLEIVVVDQNDNRPAFLQEAFTGRVLEGAVPGTYVTRAEATDADDPETDNAALRFSILQ 195
Human 196 QGSPELFSIDELTGEIRTVQVGLDREVVAVYNLTLQVADMSGDGLTATASAIITLDDINDNAPEF 260
Human 261 TRDEFFMEAIEAVSGVDVGRLEVEDRDLPGSPNWVARFTILEGDPDGQFTIRTDPKTNEGVLSIV 325
Human 326 KALDYESCEHYELKVSVQNEAPLQAAALRAERGQAKVRVHVQDTNEPPVFQENPLRTSLAEGAPP 390
Human 391 GTLVATFSARDPDTEQLQRLSYSKDYDPEDWLQVDAATGRIQTQHVLSPASPFLKGGWYRAIVLA 455
Human 456 QDDASQPRTATGTLSIEILEVNDHAPVLAPPPPGSLCSEPHQGPGLLLGATDEDLPPHGAPFHFQ 520
Human 521 LSPRLPELGRNWSLSQVNVSHARLRPRHQVPEGLHRLSLLLRDSGQPPQQREQPLNVTVCRCGKD 585
Human 586 GVCLPGAAALLAGGTGLSLGALVIVLASALLLLVLVLLVALRARFWKQSRGKGLLHGPQDDLRDN 650
Human 651 VLNYDEQGGGEEDQDAYDISQLRHPT---ALSLPLGPPPLRRDAPQGRLHPQPPRVLPTSPLDIA 712
Human 713 DFINDGLEAADSDPSVPPYDTALIYDYEGDGSVAGTLSSILSSQGDEDQDYDYLRDWGPRFARLA 777
Human 778 DMYGHP 783 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CDH15 | NP_004924.1 | Cadherin_repeat | 52..148 | CDD:206637 | 91/95 (96%) |
| Cadherin_repeat | 157..256 | CDD:206637 | 89/98 (91%) | ||
| Cadherin_repeat | 271..371 | CDD:206637 | 84/99 (85%) | ||
| Cadherin_repeat | 379..479 | CDD:206637 | 87/99 (88%) | ||
| E_set | 487..580 | CDD:298831 | 80/92 (87%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 636..663 | 21/26 (81%) | |||
| Cadherin_C | 640..781 | CDD:279398 | 122/143 (85%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 676..703 | 15/29 (52%) | |||
| Cdh15 | NP_997496.1 | Cadherin_repeat | 51..147 | CDD:206637 | 91/95 (96%) |
| Cadherin_repeat | 155..255 | CDD:206637 | 89/99 (90%) | ||
| Cadherin | 270..366 | CDD:278457 | 80/95 (84%) | ||
| Cadherin_repeat | 378..478 | CDD:206637 | 87/99 (88%) | ||
| Cadherin | 487..579 | CDD:278457 | 80/91 (88%) | ||
| Cadherin_C | 639..782 | CDD:279398 | 122/143 (85%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83690288 | |
| Domainoid | 1 | 1.000 | 270 | 1.000 | Domainoid score | I17481 |
| eggNOG | 1 | 0.900 | - | - | E33208_3BEJ8 | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H3622 | |
| Inparanoid | 1 | 1.050 | 1331 | 1.000 | Inparanoid score | I3419 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG40397 | |
| OrthoDB | 1 | 1.010 | - | - | D116242at32523 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0011795 | |
| OrthoInspector | 1 | 1.000 | - | - | oto144026 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101517 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR24027 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X9588 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 18 | 18.270 | |||||