DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTR1A and Arp53D

DIOPT Version :9

Sequence 1:NP_005727.1 Gene:ACTR1A / 10121 HGNCID:167 Length:376 Species:Homo sapiens
Sequence 2:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster


Alignment Length:365 Identity:185/365 - (50%)
Similarity:263/365 - (72%) Gaps:2/365 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSIRYPME 76
            |||||||||.||||:.:..|:..||:.||||:|:.|:..::.||..||..|...||:|:::||:|
  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPIE 113

Human    77 HGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFETFNVPALFISM 141
            ||:||:|::||.:||:.|  :.|:....:.|.|||||||||:||||:..|:.||.|.|||.::::
  Fly   114 HGMVKNWDEMEMVWQHTY--ELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAV 176

Human   142 QAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFH 206
            ||||||||||||.|:|:||||||||.||||||||:||:.:|:|:||||::.:|...|.:.|....
  Fly   177 QAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMG 241

Human   207 SSSEFEIVKAIKERACYLSINPQKDETLETEKAQYYLPDGSTIEIGPSRFRAPELLFRPDLIGEE 271
            :|:|.|||:.|||:.||:|:|..|:..|..:...|.||||..|.:|..|||.||.||:|.|:|:|
  Fly   242 TSAEREIVREIKEKLCYVSMNYAKEMDLHGKVETYELPDGQKIVLGCERFRCPEALFQPSLLGQE 306

Human   272 SEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQER 336
            ..||||....:|...|||||:.:::|||||||:|:|:....|.|.::.::||..::|:::|..:|
  Fly   307 VMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNASPDR 371

Human   337 LYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376
            .:|.|.|||:||||.:|:.||:...||||.|:..:|||.|
  Fly   372 RFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTR1ANP_005727.1 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 184/363 (51%)
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 184/363 (51%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 184/363 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.920

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