DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTR1B and Act42A

DIOPT Version :10

Sequence 1:NP_005726.1 Gene:ACTR1B / 10120 HGNCID:168 Length:376 Species:Homo sapiens
Sequence 2:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster


Alignment Length:370 Identity:201/370 - (54%)
Similarity:277/370 - (74%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTIRYPME 76
            :|:|||||:.|||||||..|:..||:.||||:|..||.|..:.|.::|.:|:..||:||::||:|
  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73

Human    77 HGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNVPALFISM 141
            ||:|.:|:|||:||.:.: .::|:...||||||||||||||..||||..::.|||||.||:::::
  Fly    74 HGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137

Human   142 QAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGVDFH 206
            ||||||||:|||||:||||||||:|.||||||:|:||:|:|:|:||||::.||..:|.:.|..|.
  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202

Human   207 TSAEFEVVRTIKERACYLSINPQKDEAL-----ETEKVQYTLPDGSTLDVGPARFRAPELLFQPD 266
            |:||.|:||.|||:.||::::.:::.|.     ..|| .|.||||..:.:|..|||.||.||||.
  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK-SYELPDGQVITIGNERFRCPESLFQPS 266

Human   267 LVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKIS 331
            .:|.|:.|:||....:|.|.|:|:|:.|:||.|||||:|::.|..||:..|:..|||..:||||.
  Fly   267 FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIV 331

Human   332 APQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376
            ||.||.||.||||||||||.||::||:||:||:|.|...:|||.|
  Fly   332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTR1BNP_005726.1 ASKHA_NBD_Arp1 9..375 CDD:466820 199/367 (54%)
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 197/363 (54%)

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