DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTR1B and Actr1b

DIOPT Version :9

Sequence 1:NP_005726.1 Gene:ACTR1B / 10120 HGNCID:168 Length:376 Species:Homo sapiens
Sequence 2:NP_001034117.2 Gene:Actr1b / 316333 RGDID:1307380 Length:376 Species:Rattus norvegicus


Alignment Length:376 Identity:372/376 - (98%)
Similarity:375/376 - (99%) Gaps:0/376 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEH 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEH 65

Human    66 RGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFE 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 RGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFE 130

Human   131 TFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLR 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 TFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLR 195

Human   196 LLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGSTLDVGPARFRAPE 260
            |||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 LLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGSTLDVGPARFRAPE 260

Human   261 LLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVLSGGSTLFKGFGDRLLSEVKKLAPKD 325
            ||||||||||||||||||:||||||||||||||||:|||||||||||||||||||||||||||||
  Rat   261 LLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKD 325

Human   326 IKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376
            :||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   326 VKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTR1BNP_005726.1 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 366/370 (99%)
Actr1bNP_001034117.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 366/370 (99%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83693495
Domainoid 1 1.000 734 1.000 Domainoid score I3227
eggNOG 1 0.900 - - E1_COG5277
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101541
Inparanoid 1 1.050 751 1.000 Inparanoid score I8141
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG55293
OrthoDB 1 1.010 - - D105664at9347
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 1 1.000 - - oto141368
orthoMCL 1 0.900 - - OOG6_103845
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3841
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1717.270

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