DRSC/TRiP Functional Genomics Resources

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Protein Alignment ARPC2 and Arpc2

DIOPT Version :9

Sequence 1:NP_005722.1 Gene:ARPC2 / 10109 HGNCID:705 Length:300 Species:Homo sapiens
Sequence 2:NP_001286102.1 Gene:Arpc2 / 35311 FlyBaseID:FBgn0032859 Length:301 Species:Drosophila melanogaster


Alignment Length:297 Identity:225/297 - (75%)
Similarity:260/297 - (87%) Gaps:0/297 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MILLEVNNRIIEETLALKFENAAAGNKPEAVEVTFADFDGVLYHISNPNGDKTKVMVSISLKFYK 65
            |||||:|||||||||.:|:.||.||.|||::::..||||||||||||.|||||||.:||||||||
  Fly     1 MILLEINNRIIEETLLVKYRNAQAGLKPESIDIRIADFDGVLYHISNVNGDKTKVRISISLKFYK 65

Human    66 ELQAHGADELLKRVYGSFLVNPESGYNVSLLYDLENLPASKDSIVHQAGMLKRNCFASVFEKYFQ 130
            :||.|||||||||.|||.|.:.|.|||||:|.:||.:|...:.|..:.|:||||||||||||||.
  Fly    66 QLQEHGADELLKREYGSLLTDTEEGYNVSVLINLEEIPEDCEQIAKRIGLLKRNCFASVFEKYFD 130

Human   131 FQEEGKEGENRAVIHYRDDETMYVESKKDRVTVVFSTVFKDDDDVVIGKVFMQEFKEGRRASHTA 195
            :||:|:||:.||||:||:|||:|||:|.|||||||||:|:|:|||:||||||||.:|||||||||
  Fly   131 YQEQGEEGQKRAVINYRNDETLYVEAKPDRVTVVFSTIFRDEDDVIIGKVFMQELREGRRASHTA 195

Human   196 PQVLFSHREPPLELKDTDAAVGDNIGYITFVLFPRHTNASARDNTINLIHTFRDYLHYHIKCSKA 260
            ||||||||||||||.:|||.|||||||:||||||||||...|||||||||.||||||||||||||
  Fly   196 PQVLFSHREPPLELANTDARVGDNIGYVTFVLFPRHTNKETRDNTINLIHMFRDYLHYHIKCSKA 260

Human   261 YIHTRMRAKTSDFLKVLNRARPDAEKKEMKTITGKTF 297
            |||:||||||||||||||||||:.:..|.|||||:||
  Fly   261 YIHSRMRAKTSDFLKVLNRARPEPKNTEKKTITGRTF 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARPC2NP_005722.1 P34-Arc 57..284 CDD:397935 176/226 (78%)
Arpc2NP_001286102.1 P34-Arc 57..284 CDD:397935 176/226 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141912
Domainoid 1 1.000 374 1.000 Domainoid score I888
eggNOG 1 0.900 - - E1_COG4690
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4187
Inparanoid 1 1.050 472 1.000 Inparanoid score I1517
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54321
OrthoDB 1 1.010 - - D1345377at2759
OrthoFinder 1 1.000 - - FOG0004402
OrthoInspector 1 1.000 - - oto89842
orthoMCL 1 0.900 - - OOG6_102851
Panther 1 1.100 - - LDO PTHR12058
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R88
SonicParanoid 1 1.000 - - X3120
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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