DRSC/TRiP Functional Genomics Resources

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Protein Alignment OPN1MW3 and daf-37

DIOPT Version :9

Sequence 1:NP_001316996.1 Gene:OPN1MW3 / 101060233 HGNCID:51831 Length:364 Species:Homo sapiens
Sequence 2:NP_001309490.1 Gene:daf-37 / 183041 WormBaseID:WBGene00016246 Length:482 Species:Caenorhabditis elegans


Alignment Length:357 Identity:69/357 - (19%)
Similarity:126/357 - (35%) Gaps:97/357 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    53 YHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISVVNQVYG 117
            :.|.||....:.:..:|.|. ..|..:....:|:|.|..|..|||.|....:.|..|..:..:..
 Worm    33 FFLISVVGTLIGLFGLFGNA-TTALILTRPSMRNPNNLFLTALAVFDSCLLITAFFIYAMEYIIE 96

Human   118 Y-----------------FVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFD 165
            |                 |.|.|         :|..|  .::....::.||::.||.|    :..
 Worm    97 YTAAFDLYVAWLTYLRFAFALSH---------ISQTG--SVYITVAVTIERYLAVCHP----KSS 146

Human   166 AKLAIVGIAFSWIWAAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIV-------- 222
            ..:...|.| :|....|.|...:|..::::.  |:.:..|....||::   |||:::        
 Worm   147 KNMCGPGGA-AWTILGVTTFAVVFNCTKFFE--LQVTVNPSCPDGSNW---QSYILLPSAMASNP 205

Human   223 ---LMVTCCITPLSIIVLCYLQVWL--AI-------------------------------RAVAK 251
               .:.:..:|...::...:|.:.|  ||                               |.:|.
 Worm   206 IYQQVYSLWVTNFVMVFFPFLTLLLFNAIIAYTIRQSLEKYDFHNQKSVVAALSASVNLPRNIAG 270

Human   252 QQKESESTQKAEKEVTRMVVVMVLAFCFC--WGPYAFFACFAAANPG--------YPFHPLMAAL 306
            ....:|..:|: :|.|.::|::|..|..|  ||   |.........|        :.|:......
 Worm   271 ISSRNELKEKS-REATLVLVIIVFIFLGCNFWG---FVLTLLERIMGQETLMVEHHIFYTFSREA 331

Human   307 PAFFAKSATIYNPVIYVFMNRQFRNCILQLFG 338
            ..|.|...:..|.|||:...:.||..::.::|
 Worm   332 INFLAIINSSINFVIYLLFGKDFRKELVVVYG 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OPN1MW3NP_001316996.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Required for 11-cis-retinal regeneration. /evidence=ECO:0000250|UniProtKB:P04001 17..43
7tm_4 61..>178 CDD:304433 26/133 (20%)
7tm_1 71..322 CDD:278431 60/321 (19%)
daf-37NP_001309490.1 7tm_4 34..>213 CDD:304433 40/200 (20%)
7tm_1 55..347 CDD:278431 59/316 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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