| Sequence 1: | NP_001316996.1 | Gene: | OPN1MW3 / 101060233 | HGNCID: | 51831 | Length: | 364 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_497452.1 | Gene: | ser-4 / 175322 | WormBaseID: | WBGene00004779 | Length: | 445 | Species: | Caenorhabditis elegans |
| Alignment Length: | 422 | Identity: | 73/422 - (17%) |
|---|---|---|---|
| Similarity: | 120/422 - (28%) | Gaps: | 192/422 - (45%) |
- Green bases have known domain annotations that are detailed below.
|
Human 55 LTSVWMIFVVIASVFTNGL-VLAATMKFKKLR-HPLNWILVNLAVADLAETVIASTISVVNQVYG 117
Human 118 YFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERW----MVVCKPFGNVRFDAKLAIVGIAFSWI 178
Human 179 W--------------------AAVW------TAPPIFGW--SRYWPHGLKTS-CGPDVFSGSSYP 214
Human 215 GVQSYMIVLMVTCCITPLSIIVLCYLQVWLAIRAVAKQQK------------------------- 254
Human 255 -------------------------------------------ESEST----------------- 259
Human 260 ------------------------QKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANP--GYP 298
Human 299 FHPLMAALPAFFAKSATIYNPVIYVFMNRQFR 330 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| OPN1MW3 | NP_001316996.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..23 | ||
| Required for 11-cis-retinal regeneration. /evidence=ECO:0000250|UniProtKB:P04001 | 17..43 | ||||
| 7tm_4 | 61..>178 | CDD:304433 | 29/122 (24%) | ||
| 7tm_1 | 71..322 | CDD:278431 | 62/396 (16%) | ||
| ser-4 | NP_497452.1 | 7tmA_5-HT1A_invertebrates | 52..432 | CDD:320454 | 73/422 (17%) |
| TM helix 1 | 53..79 | CDD:320454 | 10/26 (38%) | ||
| TM helix 2 | 87..113 | CDD:320454 | 7/31 (23%) | ||
| TM helix 3 | 125..155 | CDD:320454 | 8/36 (22%) | ||
| TM helix 4 | 166..188 | CDD:320454 | 3/21 (14%) | ||
| TM helix 5 | 210..239 | CDD:320454 | 8/36 (22%) | ||
| TM helix 6 | 361..391 | CDD:320454 | 7/32 (22%) | ||
| TM helix 7 | 400..425 | CDD:320454 | 5/24 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||