DRSC/TRiP Functional Genomics Resources

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Protein Alignment CTDSP2 and ttm2

DIOPT Version :9

Sequence 1:XP_005268613.1 Gene:CTDSP2 / 10106 HGNCID:17077 Length:277 Species:Homo sapiens
Sequence 2:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster


Alignment Length:196 Identity:59/196 - (30%)
Similarity:86/196 - (43%) Gaps:33/196 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    96 LLPEVTEED--QGRICVVIDLDETLVHSSFKPINNADFIVPIEIEGTTHQV--YVLKRPYVDEFL 156
            |||:..:..  |....:|:::.:.|||..:                 |::.  ...|||.||.||
  Fly   196 LLPDPLQPPYVQPPYTLVLEIKDVLVHPDW-----------------TYETGWRFKKRPGVDVFL 243

Human   157 RRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLI 221
            :...:.||.|::||.......|:.|.||..|....||.|:|..|..|.:||:|..|.|||::.::
  Fly   244 KECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVV 308

Human   222 LDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPIFEELSGAE--DV------YT----SLGQL 274
            :|....|..|||.|:..:..|..:..||.|..|......|..:|  ||      |.    ||.|.
  Fly   309 VDWDRNSTKFHPSNSFSIPRWSGNDNDTTLFELTSFLSVLGTSEIDDVREVLQYYNQFSDSLSQF 373

Human   275 R 275
            |
  Fly   374 R 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTDSP2XP_005268613.1 HIF-SF_euk 107..266 CDD:274055 48/162 (30%)
ttm2NP_612023.1 CPDc 208..336 CDD:214729 42/144 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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