DRSC/TRiP Functional Genomics Resources

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Protein Alignment rnf167 and SPAC57A7.09

DIOPT Version :9

Sequence 1:XP_005165694.2 Gene:rnf167 / 101055497 ZFINID:ZDB-GENE-110126-2 Length:401 Species:Danio rerio
Sequence 2:NP_593372.1 Gene:SPAC57A7.09 / 2542187 PomBaseID:SPAC57A7.09 Length:372 Species:Schizosaccharomyces pombe


Alignment Length:320 Identity:72/320 - (22%)
Similarity:129/320 - (40%) Gaps:66/320 - (20%)


- Green bases have known domain annotations that are detailed below.


Zfish    26 QAYIYAHYSN--MTSMLFEDLPALF--------------GSALPKDGLMGVLIEARPQNACTPID 74
            ||....|::|  .|:::...||:.|              .|...::.::...||...|.:   ..
pombe    60 QAVFGKHFTNASATTVINLYLPSNFQEDMSGCPNRNDTDASYFYENDIIDYDIEYIEQKS---YS 121

Zfish    75 PPPASPTPADPNSTTK-----YIVLIRRYDCNFDVKVYHAQQAGYSAAIVHNMYSNSLLNMGY-- 132
            ..|::....|....:|     ..:|::|..|.:..|...||:.|:...||.:..|.|...:.|  
pombe   122 SKPSARVQKDDGGESKDEAILDFLLVQRGKCTYFDKALEAQRLGFKGVIVGDNRSPSSFRLHYMV 186

Zfish   133 -SNETIAEEISIPSVFTS-----FFASQMLHKIIPEKGAYVVLKPE----FSFPLSYYLIPFTGV 187
             .::....::.|||:|.|     ...|.:||........|.  |||    ..:|   :|:.|:..
pombe   187 APDKVDESKVHIPSLFVSTSSYNLLWSDLLHSYRQPLKLYA--KPEELGDMFWP---FLLCFSPS 246

Zfish   188 VCMIIIV--MVIIMIVRCVQHRKRLRK-------NRLSKEQL--------------KKIPI-HKF 228
            :.|:|.|  :.|...:|..:.:.:.|:       ..:|:|..              :.:|: .:.
pombe   247 IIMLITVQALAIRKFIRTYRTKSKTRRFIEDLPSRTISREGFYSEEEEIENSTQNGELVPLMDES 311

Zfish   229 NKGDSYDV-CAICLDEYEEGDKLRVLPCSHAYHSRCVDPWLTQTKKTCPVCKQRVTRPNP 287
            .:..::.| |.|||:.:.:|||:..|||.|.:|..|:..|:...:..||.|...|..|.|
pombe   312 TRRATFGVECVICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTCNTEVPPPKP 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnf167XP_005165694.2 PA_C_RZF_like 14..177 CDD:239038 39/183 (21%)
RING-H2_RNF167 235..280 CDD:319711 18/45 (40%)
RING-H2 finger (C3H2C3-type) 237..278 CDD:319711 16/40 (40%)
SPAC57A7.09NP_593372.1 COG5540 1..369 CDD:227827 70/316 (22%)
Peptidases_S8_S53 <144..211 CDD:299169 17/66 (26%)
zf-RING_2 320..362 CDD:290367 16/41 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 70 1.000 Inparanoid score I2160
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm34392
orthoMCL 1 0.900 - - OOG6_103040
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.860

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