DRSC/TRiP Functional Genomics Resources

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Protein Alignment NOTCH2NLC and N

DIOPT Version :10

Sequence 1:NP_001350942.1 Gene:NOTCH2NLC / 100996717 HGNCID:53924 Length:293 Species:Homo sapiens
Sequence 2:NP_476859.2 Gene:N / 31293 FlyBaseID:FBgn0004647 Length:2703 Species:Drosophila melanogaster


Alignment Length:246 Identity:107/246 - (43%)
Similarity:143/246 - (58%) Gaps:24/246 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    53 CVNEGMCVTYHNGTGYCKCPEGFLGEYCQHRDPCEKNRCQNGGTCVAQAMLGK--ATCRCASGFT 115
            |.|.|.|||..||..||.|...::|:||:||:||...||||||||......|:  .:|:|..||.
  Fly    67 CQNGGTCVTQLNGKTYCACDSHYVGDYCEHRNPCNSMRCQNGGTCQVTFRNGRPGISCKCPLGFD 131

Human   116 GEDCQYSTSHPC-FVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQWTDACLSHPCANGSTCTT 179
            ...|:.:..:.| .|:  |||||||.:.:.:.|.|.|..|:||:.|:..:.|.|.||.||:|||.
  Fly   132 ESLCEIAVPNACDHVT--CLNGGTCQLKTLEEYTCACANGYTGERCETKNLCASSPCRNGATCTA 194

Human   180 VA--NQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCLQGFTGQYCDSLYVP 242
            :|  :.|:|.|..||||..|..|:.||. ...|::||||:|..|||||.|..|:||:.||:.|.|
  Fly   195 LAGSSSFTCSCPPGFTGDTCSYDIEECQ-SNPCKYGGTCVNTHGSYQCMCPTGYTGKDCDTKYKP 258

Human   243 CAPSPCVNGGTCRQTGDFTFECNCLPETVRRGTELWERDREVWNGKEHDEN 293
            |:||||.|||.||..| .::||.|     .:|.|          ||..::|
  Fly   259 CSPSPCQNGGICRSNG-LSYECKC-----PKGFE----------GKNCEQN 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NOTCH2NLCNP_001350942.1 EGF_CA 200..236 CDD:238011 18/35 (51%)
NNP_476859.2 EGF_CA 179..214 CDD:238011 17/34 (50%)
EGF_CA 217..252 CDD:238011 18/35 (51%)
EGF_CA 260..291 CDD:238011 17/46 (37%)
EGF_CA 295..329 CDD:238011
EGF_CA 331..369 CDD:238011
EGF_CA 449..486 CDD:238011
EGF_CA 488..524 CDD:238011
EGF_CA 526..562 CDD:238011
EGF_CA 564..600 CDD:238011
EGF_CA 602..637 CDD:238011
EGF_CA 640..675 CDD:238011
EGF_CA 677..713 CDD:238011
EGF_CA 715..750 CDD:238011
EGF_CA 753..789 CDD:238011
EGF_CA 791..827 CDD:238011
EGF_CA 829..865 CDD:238011
EGF_CA 907..943 CDD:238011
EGF_CA 946..982 CDD:238011
EGF_CA 984..1020 CDD:238011
EGF_CA 1027..1058 CDD:238011
EGF_CA 1062..1095 CDD:238011
EGF_CA 1184..1219 CDD:238011
EGF_CA 1221..1257 CDD:238011
EGF_CA 1259..1295 CDD:238011
EGF_CA 1297..1335 CDD:238011
EGF_CA 1338..1373 CDD:238011
EGF_CA 1417..1450 CDD:238011
NL 1476..1512 CDD:197463
Notch 1519..1553 CDD:459658
Notch 1565..1593 CDD:459658
NOD 1598..1652 CDD:462014
NODP 1679..1731 CDD:462229
JMTM_dNotch 1719..1806 CDD:411989
ANK repeat 1902..1948 CDD:293786
ANKYR 1936..2139 CDD:440430
ANK repeat 1951..1981 CDD:293786
ANK repeat 1984..2015 CDD:293786
ANK repeat 2017..2048 CDD:293786
ANK repeat 2050..2081 CDD:293786
ANK repeat 2083..2114 CDD:293786
Blue background indicates that the domain is not in the aligned region.

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