DRSC/TRiP Functional Genomics Resources

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Protein Alignment NOTCH2NLC and Y71F9B.15

DIOPT Version :10

Sequence 1:NP_001350942.1 Gene:NOTCH2NLC / 100996717 HGNCID:53924 Length:293 Species:Homo sapiens
Sequence 2:NP_491043.3 Gene:Y71F9B.15 / 190592 WormBaseID:WBGene00022133 Length:727 Species:Caenorhabditis elegans


Alignment Length:110 Identity:27/110 - (24%)
Similarity:36/110 - (32%) Gaps:28/110 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    84 DPCEKNRCQN---GGTCVAQAMLGKATCRCAS---GFTGEDCQYS---TSHPCFVSRPCLNGGTC 139
            |.|.||...|   ........:|||    |::   |....|...|   ..|...:.:..|..||.
 Worm   288 DKCNKNLLSNMLHTNRPFPAVLLGK----CSNPKPGLILGDHHISHTINQHHLCIQKKRLKAGTT 348

Human   140 HMLSRDTYECT----------CQVGFTGKECQWTDACLSHPCANG 174
            .:..:|.|..|          |.:..|...|..||     |.|:|
 Worm   349 VLFKKDIYTSTTEYYNGKIVDCDLPKTSLFCVETD-----PDAHG 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NOTCH2NLCNP_001350942.1 EGF_CA 200..236 CDD:238011
Y71F9B.15NP_491043.3 DUF316 8..217 CDD:367641
PHA03247 <460..687 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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