DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACTR3 and Arp1

DIOPT Version :10

Sequence 1:NP_005712.1 Gene:ACTR3 / 10096 HGNCID:170 Length:418 Species:Homo sapiens
Sequence 2:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster


Alignment Length:406 Identity:136/406 - (33%)
Similarity:207/406 - (50%) Gaps:61/406 - (15%)


- Green bases have known domain annotations that are detailed below.


Human     9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIE-KPTY 72
            |:|.|:|..|.|:||...|:...|:.|        |.....|||.|..:.|.|:|.:|.| :...
  Fly    13 VIDNGSGVIKAGFAGEHIPKCRFPNYI--------GRPKHVRVMAGALEGDIFVGPKAEEHRGLL 69

Human    73 ATKWPIRHGIVEDWDLMERFMEQVIFK-YLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNV 136
            :.::|:.||||.||:.|||....:..| .|....|||..||||.|||...|||..||..||..|.
  Fly    70 SIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINA 134

Human   137 PGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201
            |.|::::||||:|.|  |.|      :||.|:||||||||.:|:.||:.:...|..:.|||||:|
  Fly   135 PALFVSMQAVLSLYA--TGR------VTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVT 191

Human   202 YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKE 266
            .:::.|:|............|..:::||:..|:..:..||                  ..:..::
  Fly   192 RYLKTLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKE------------------ETVETEK 238

Human   267 FS--------IDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSG 323
            |:        .::|..||..||:.|.|:....: .:.|.:|:...|:...:|:|:.||:||||||
  Fly   239 FAYKLPDGKIFEIGPARFRAPEVLFRPDLLGEE-CEGIHDVLMYSIEKSDMDLRKMLYQNIVLSG 302

Human   324 GSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTP 388
            |||:|:.||.||..:||:.                ..|.:.:::.....:.|:.|.|||:|||..
  Fly   303 GSTLFKGFGDRLLSELKKH----------------SAKDLKIRIAAPQERLYSTWMGGSILASLD 351

Human   389 EFYQVCHTKKDYEEIG 404
            .|.::..:|::|||.|
  Fly   352 TFKKMWISKREYEEEG 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTR3NP_005712.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 136/406 (33%)
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 136/406 (33%)

Return to query results.
Submit another query.