DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EDIL3 and edil3a

DIOPT Version :9

Sequence 1:NP_005702.3 Gene:EDIL3 / 10085 HGNCID:3173 Length:480 Species:Homo sapiens
Sequence 2:XP_001332616.3 Gene:edil3a / 793444 ZFINID:ZDB-GENE-060503-366 Length:436 Species:Danio rerio


Alignment Length:415 Identity:372/415 - (89%)
Similarity:401/415 - (96%) Gaps:0/415 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    66 ASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKN 130
            |:|.|:|||||||.||||||||.|||||.:|||||||||||||.||||||||||:||||..||:|
Zfish    22 AADGEDPTSAGPCHPNPCHNGGICEISETFRGDTFIGYVCKCPSGFNGIHCQHNVNECERSPCRN 86

Human   131 GGICTDLVANYSCECPGEFMGRNCQYKCSGPLGIEGGIISNQQITASSTHRALFGLQKWYPYYAR 195
            ||||||||||||||||||:||||||||||||||:||||||||||||||||||||||||||||:||
Zfish    87 GGICTDLVANYSCECPGEYMGRNCQYKCSGPLGMEGGIISNQQITASSTHRALFGLQKWYPYFAR 151

Human   196 LNKKGLINAWTAAENDRWPWIQINLQRKMRVTGVITQGAKRIGSPEYIKSYKIAYSNDGKTWAMY 260
            ||||||:||||||||||||||||||||:|||||||||||||||||||:||||:|||:|||||..|
Zfish   152 LNKKGLVNAWTAAENDRWPWIQINLQRRMRVTGVITQGAKRIGSPEYVKSYKVAYSDDGKTWRTY 216

Human   261 KVKGTNEDMVFRGNIDNNTPYANSFTPPIKAQYVRLYPQVCRRHCTLRMELLGCELSGCSEPLGM 325
            |||||:||::||||||||||:||||||||:|||||:||||||||||||||||||||||||||:||
Zfish   217 KVKGTDEDIIFRGNIDNNTPFANSFTPPIEAQYVRIYPQVCRRHCTLRMELLGCELSGCSEPMGM 281

Human   326 KSGHIQDYQITASSIFRTLNMDMFTWEPRKARLDKQGKVNAWTSGHNDQSQWLQVDLLVPTKVTG 390
            ||||||||||||||||||||||||||||.|||||||||||||||||:|||||||||:|.|||:||
Zfish   282 KSGHIQDYQITASSIFRTLNMDMFTWEPGKARLDKQGKVNAWTSGHSDQSQWLQVDMLRPTKITG 346

Human   391 IITQGAKDFGHVQFVGSYKLAYSNDGEHWTVYQDEKQRKDKVFQGNFDNDTHRKNVIDPPIYARH 455
            |||||||||||||||||||:||||:||.|.:||||||:||||||||||||||||||||||||||.
Zfish   347 IITQGAKDFGHVQFVGSYKVAYSNNGERWLIYQDEKQKKDKVFQGNFDNDTHRKNVIDPPIYARF 411

Human   456 IRILPWSWYGRITLRSELLGCTEEE 480
            :||||||||||||||:|||||||||
Zfish   412 VRILPWSWYGRITLRAELLGCTEEE 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EDIL3NP_005702.3 EGF_CA 27..59 CDD:238011
EGF_CA 79..117 CDD:238011 32/37 (86%)
Cell attachment site (Potential) 96..98 1/1 (100%)
EGF_CA 119..155 CDD:238011 30/35 (86%)
FA58C 157..314 CDD:214572 141/156 (90%)
FA58C 160..313 CDD:238014 137/152 (90%)
FA58C 318..476 CDD:214572 142/157 (90%)
FA58C 321..475 CDD:238014 138/153 (90%)
edil3aXP_001332616.3 EGF 34..71 CDD:278437 31/36 (86%)
EGF_CA 75..111 CDD:238011 30/35 (86%)
FA58C 113..270 CDD:214572 141/156 (90%)
FA58C 116..269 CDD:238014 137/152 (90%)
FA58C 274..432 CDD:214572 142/157 (90%)
FA58C 277..431 CDD:238014 138/153 (90%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194323397
Domainoid 1 1.000 279 1.000 Domainoid score I8292
eggNOG 1 0.900 - - E1_28MRG
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21166
Inparanoid 1 1.050 828 1.000 Inparanoid score I3288
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49055
OrthoDB 1 1.010 - - D211373at33208
OrthoFinder 1 1.000 - - FOG0004063
OrthoInspector 1 1.000 - - oto48590
orthoMCL 1 0.900 - - OOG6_104850
Panther 1 1.100 - - LDO PTHR24543
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6342
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1717.270

Return to query results.
Submit another query.