DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EDIL3 and Edil3

DIOPT Version :9

Sequence 1:NP_005702.3 Gene:EDIL3 / 10085 HGNCID:3173 Length:480 Species:Homo sapiens
Sequence 2:XP_002729040.2 Gene:Edil3 / 688400 RGDID:1588887 Length:479 Species:Rattus norvegicus


Alignment Length:480 Identity:461/480 - (96%)
Similarity:468/480 - (97%) Gaps:1/480 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MKRSVAVWLLVGLSLGVPQFGKGDICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEV 65
            ||..||.|||||| ||||||.|||||:|||||||||||.||||.|||||||||||||||||||||
  Rat     1 MKHLVAAWLLVGL-LGVPQFVKGDICNPNPCENGGICLSGLADDSFSCECPDGFTDPNCSSVVEV 64

Human    66 ASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKN 130
            |||||:|||||||.||||||||||||||||||||||.||||||:|||||||||||||||.|||:|
  Rat    65 ASDEEKPTSAGPCIPNPCHNGGTCEISEAYRGDTFIDYVCKCPQGFNGIHCQHNINECEAEPCRN 129

Human   131 GGICTDLVANYSCECPGEFMGRNCQYKCSGPLGIEGGIISNQQITASSTHRALFGLQKWYPYYAR 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   130 GGICTDLVANYSCECPGEFMGRNCQYKCSGPLGIEGGIISNQQITASSTHRALFGLQKWYPYYAR 194

Human   196 LNKKGLINAWTAAENDRWPWIQINLQRKMRVTGVITQGAKRIGSPEYIKSYKIAYSNDGKTWAMY 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   195 LNKKGLINAWTAAENDRWPWIQINLQRKMRVTGVITQGAKRIGSPEYIKSYKIAYSNDGKTWAMY 259

Human   261 KVKGTNEDMVFRGNIDNNTPYANSFTPPIKAQYVRLYPQVCRRHCTLRMELLGCELSGCSEPLGM 325
            |||||||:||||||:||||||||||||||||||||||||:|||||||||||.|||||||||||||
  Rat   260 KVKGTNEEMVFRGNVDNNTPYANSFTPPIKAQYVRLYPQICRRHCTLRMELFGCELSGCSEPLGM 324

Human   326 KSGHIQDYQITASSIFRTLNMDMFTWEPRKARLDKQGKVNAWTSGHNDQSQWLQVDLLVPTKVTG 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   325 KSGHIQDYQITASSIFRTLNMDMFTWEPRKARLDKQGKVNAWTSGHNDQSQWLQVDLLVPTKVTG 389

Human   391 IITQGAKDFGHVQFVGSYKLAYSNDGEHWTVYQDEKQRKDKVFQGNFDNDTHRKNVIDPPIYARH 455
            ||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
  Rat   390 IITQGAKDFGHVQFVGSYKLAYSNDGEHWTVYQDAKQRKDKVFQGNFDNDTHRKNVIDPPIYARH 454

Human   456 IRILPWSWYGRITLRSELLGCTEEE 480
            |||||||||||||||||||||||||
  Rat   455 IRILPWSWYGRITLRSELLGCTEEE 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EDIL3NP_005702.3 EGF_CA 27..59 CDD:238011 28/31 (90%)
EGF_CA 79..117 CDD:238011 34/37 (92%)
Cell attachment site (Potential) 96..98 1/1 (100%)
EGF_CA 119..155 CDD:238011 33/35 (94%)
FA58C 157..314 CDD:214572 152/156 (97%)
FA58C 160..313 CDD:238014 149/152 (98%)
FA58C 318..476 CDD:214572 156/157 (99%)
FA58C 321..475 CDD:238014 152/153 (99%)
Edil3XP_002729040.2 EGF_CA 27..58 CDD:238011 28/30 (93%)
EGF_CA 79..116 CDD:238011 34/36 (94%)
EGF_CA 118..154 CDD:238011 33/35 (94%)
FA58C 156..313 CDD:214572 152/156 (97%)
FA58C 159..312 CDD:238014 149/152 (98%)
FA58C 317..475 CDD:214572 156/157 (99%)
FA58C 320..474 CDD:238014 152/153 (99%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83676939
Domainoid 1 1.000 296 1.000 Domainoid score I15729
eggNOG 00.000 Not matched by this tool.
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21166
Inparanoid 1 1.050 994 1.000 Inparanoid score I5492
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG49055
OrthoDB 1 1.010 - - D169131at32523
OrthoFinder 1 1.000 - - FOG0004063
OrthoInspector 1 1.000 - - oto136474
orthoMCL 1 0.900 - - OOG6_104850
Panther 1 1.100 - - LDO PTHR24543
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6342
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1616.410

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