DRSC/TRiP Functional Genomics Resources

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Protein Alignment PQBP1 and pqbp1

DIOPT Version :10

Sequence 1:NP_005701.1 Gene:PQBP1 / 10084 HGNCID:9330 Length:265 Species:Homo sapiens
Sequence 2:NP_001002435.1 Gene:pqbp1 / 796523 ZFINID:ZDB-GENE-030616-158 Length:261 Species:Danio rerio


Alignment Length:274 Identity:167/274 - (60%)
Similarity:203/274 - (74%) Gaps:28/274 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSCGLPYY 65
            ||||.||..|||||||:|..:.|.|||||||||||:.|||||||:|.||.:||||||.:||||||
Zfish     1 MPLPPALLARLAKRGIVKQSDHEAEEEIIAEDYDDNNVDYEATRIESLPSNWYKVFDSACGLPYY 65

Human    66 WNADTDLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRSHEKLDRGHDK 130
            ||.:|||||||||:||.:|:||:|||                .|.:.||:|.|..:||.:|..|:
Zfish    66 WNVETDLVSWLSPNDPAAVITKAAKK----------------PKGETGHEKGDGHYEKTERDRDR 114

Human   131 SDRGHDKS-DRDRERGYDKVDRERERDRERDRDRGYDK-ADREEGKERRHHRREELAPYPKSKKA 193
             ||..|:. :|||||..|: ||:..|||:|||||..|: .||:..::|| .|||:.|||.|||:.
Zfish   115 -DRERDRDRERDRERDRDR-DRDDGRDRDRDRDRDRDRERDRDRDRDRR-MRREDSAPYSKSKRG 176

Human   194 VS-------RKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSPGAV 251
            .|       ::.||:||||||:|||||||:|||||||||||||||||||||||||||||||||||
Zfish   177 GSGGGGSRKQQQEEMDPMDPSAYSDAPRGSWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSPGAV 241

Human   252 LRANAEASRTKQQD 265
            ||||||.:|..:::
Zfish   242 LRANAENTRRLEEE 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PQBP1NP_005701.1 WW 47..78 CDD:197736 23/30 (77%)
Disordered. /evidence=ECO:0000269|PubMed:19303059 94..265 100/179 (56%)
5 X 7 AA approximate tandem repeats of D-R-[SG]-H-D-K-S 104..138 12/33 (36%)
3 X 2 AA tandem repeats of [DE]-R 139..144 3/4 (75%)
7 X 2 AA tandem repeats of [DE]-R 150..163 8/12 (67%)
Important for interaction with TXNL4A 245..255 9/9 (100%)
pqbp1NP_001002435.1 None

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