Sequence 1: | XP_016872564.1 | Gene: | USH1C / 10083 | HGNCID: | 12597 | Length: | 956 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001246755.1 | Gene: | bbg / 39583 | FlyBaseID: | FBgn0087007 | Length: | 2637 | Species: | Drosophila melanogaster |
Alignment Length: | 846 | Identity: | 167/846 - (19%) |
---|---|---|---|
Similarity: | 305/846 - (36%) | Gaps: | 222/846 - (26%) |
- Green bases have known domain annotations that are detailed below.
Human 146 THEEVINLIRTKKTVSIKVRHI----GLIPVKSSPD---EPLTWQYVDQFVSESGGVRGSLGSPG 203
Human 204 NRENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSN 268
Human 269 LDHKEAVNVLKSSRSLTISIVAAAGRELFMTDRERLAEARQRELQRQELLMQK-----RLAMESN 328
Human 329 KILQEQQEMERQRRKEIAQKAAEENERYRKEMEQIVEEEEK--FKKQWEE---------DWGSKE 382
Human 383 QLLLPKTITAEVHPVPLRKPKSFGWFYRYDGKFPTIRKKGKD---------KKKAKYG---SLQD 435
Human 436 LRKNKKELEFEQKLYKEKEEMLEKEKQLKINRL-AQEVSETEREDLEESEKIQYWVERLCQTRLE 499
Human 500 QISSADNEISEMTTGPPPPPPSVSPLAPPLRRFAG-GLHLHTTDLDDIPLDMFYYPPK----TPS 559
Human 560 ALP-VMPHPP-PSNPPHKVPAPPVLPLSGHVSASSSPWVQRTPPPIPI----------PPPPSVP 612
Human 613 TQDLTPTRPLPSALEEALSNHPFRTGDTGNPVEDWEAKNHSGKPTNSPVPEQSFPPTPKTFCPSP 677
Human 678 QPPRGPGVSTISKPVMVHQEPNFIYRPAVKSEVLPQEMLKRMVVYQTAFRQDFRKYEEGFDPYSM 742
Human 743 FTPEQIMGKDVRLLRIKKEGSLDLALEGGVDSPIGKVVVSAVYERGAAERHGGIVKGDEIMAING 807
Human 808 KIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCPPKEYDDELASLPSSVAESPQPVRK---LLED 869
Human 870 RAAVHRHGFLLQLEPTVNRQAGHRALC-VPAACSGHLLPTLSAGSL---DWRLEGTQGAIPEVLP 930
Human 931 G 931 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
USH1C | XP_016872564.1 | None | |||
bbg | NP_001246755.1 | PDZ_signaling | 90..177 | CDD:238492 | |
ATP-synt_B | <1084..>1109 | CDD:304375 | 5/24 (21%) | ||
PDZ_signaling | 2331..2413 | CDD:238492 | |||
PDZ_signaling | 2553..2634 | CDD:238492 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |