| Sequence 1: | XP_016872564.1 | Gene: | USH1C / 10083 | HGNCID: | 12597 | Length: | 956 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_727061.2 | Gene: | CG5921 / 31538 | FlyBaseID: | FBgn0029835 | Length: | 886 | Species: | Drosophila melanogaster |
| Alignment Length: | 229 | Identity: | 89/229 - (38%) |
|---|---|---|---|
| Similarity: | 128/229 - (55%) | Gaps: | 15/229 - (6%) |
- Green bases have known domain annotations that are detailed below.
|
Human 82 SRKLKEVRLDRLHPEGL-----------GLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIV 135
Human 136 RINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPDEPLTWQYVDQFVSESGGVRGSLG 200
Human 201 SPGNRENKEKKVFISL-VGSR-GLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNG 263
Human 264 VDFSNLDHKEAVNVLKSSRSLTISIVAAAGRELF 297 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| USH1C | XP_016872564.1 | harmonin_N | 2..80 | CDD:259819 | |
| PDZ1_harmonin | 84..168 | CDD:467219 | 37/94 (39%) | ||
| PDZ2_harmonin | 208..289 | CDD:467220 | 35/82 (43%) | ||
| tolA_full | <302..>383 | CDD:274303 | |||
| PDZ3_harmonin | 751..843 | CDD:467221 | |||
| CG5921 | NP_727061.2 | PDZ1_harmonin | 72..155 | CDD:467219 | 32/82 (39%) |
| PDZ_canonical | 195..276 | CDD:483948 | 35/80 (44%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||