DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GPC6 and dlp

DIOPT Version :10

Sequence 1:NP_005699.1 Gene:GPC6 / 10082 HGNCID:4454 Length:555 Species:Homo sapiens
Sequence 2:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster


Alignment Length:653 Identity:222/653 - (33%)
Similarity:316/653 - (48%) Gaps:134/653 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    11 PLLGLLLSL-----------------------PAGA-------DVKARSCGEVRQAYGAKGFSLA 45
            |||.|||:.                       |||.       |..:.:|..|...:.|:|....
  Fly    31 PLLLLLLTTHLPPTLQADNGPAPQVAALAAPNPAGGVAGSSIIDQFSPNCSAVTHIFQARGIDAI 95

Human    46 DIPYQEIAGEHLRIC--PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEF 108
            :||.:......||.|  |...||||..||.:::.||:.:.|...::....:.....|:..||.:.
  Fly    96 EIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQLEGHTKDQISRMSGILGSKATKFKDI 160

Human   109 FRELLENAEKSLNDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMF 173
            |..||:.:....|.||:||||::|.:||.||.|||.||:.|:..|.|:|.|:::.|:..|.::||
  Fly   161 FTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFKELETYFANGRVDLLEVMDKFFNTLYQKMF 225

Human   174 QLINPQYHFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKV 238
            .::|.||.|.|:|:.|||::..:||||||||.||.:|:.|:|:|.||:.|.||...|||.:|..|
  Fly   226 TVLNTQYTFDENYMRCVSEHMKELKPFGDVPDKLSVQIKRSFVATRTYGQALTTASEVAKKVLNV 290

Human   239 SPTPGCIRALMKMLYCPYCRGLPTVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAERLE 303
            .....|..||.||.:|..|:|. |.:||.|||:||:||||..|.:.|:||..|..||..|||||.
  Fly   291 RLNADCTGALTKMQHCGACKGY-TEKPCTNYCVNVIKGCLHYQHEFDSEWENFAMAMDKVAERLL 354

Human   304 GPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRS------------ARSA 356
            |.|||..|::|:::||||||||.|::...::.:||||||:||.....||            ||| 
  Fly   355 GSFNIVMVVEPLNIKISEAIMNFQDSGQDITNRVFQGCGRPKLKKMKRSISPKLQGVQILNARS- 418

Human   357 PENFNT--------------RFRPYNPEERPTTA-------AGTS-------------------- 380
            |...:|              ..|...|..:.|:|       .|.|                    
  Fly   419 PVEADTLDIDETLDEAIVLRERRAAEPGSQETSAQQSQEQGVGKSGNGGGGGGGNNRRQQQRRKQ 483

Human   381 ----------------------------LDRLVTDIKEKLKLSKKVWSALPYTICKDESVTAGTS 417
                                        |||:|.||::::|..||.||.||:::|.:|.:.:.:.
  Fly   484 QQQRRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQRVKDYKKFWSNLPHSVCSNEDIASSSD 548

Human   418 NEEECWNGHSKARYLPEIMNDGLTNQINNPEV--DVDITRPDTFIRQQIMALRVMTNKLKNAYNG 480
            .:..|||||:..||:..|    .|...:|||.  :...|:....:..|:..|:.....|:|||||
  Fly   549 VDGMCWNGHTIDRYMHSI----TTEHGSNPEFTGNPASTKQTAQMASQLSHLKNAIVHLRNAYNG 609

Human   481 NDVNFQDTSD---ESSGSGSGSGCMDDVCPTE------FE---FVTTEAPAVDPDRREVDSSAAQ 533
            .||.:.:..:   ..||:|||||..||....|      ||   ....|.|:||.|..: |..|..
  Fly   610 QDVEWSEQEELPYAGSGAGSGSGSEDDEDDDEGSGLGPFEPSHKPDVERPSVDADNDD-DEDAGG 673

Human   534 RGH 536
            |||
  Fly   674 RGH 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPC6NP_005699.1 Glypican 22..548 CDD:460084 214/619 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..376 10/53 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 480..501 9/23 (39%)
dlpNP_524071.2 Glypican 79..619 CDD:460084 190/545 (35%)

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