DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GPC6 and dally

DIOPT Version :9

Sequence 1:NP_005699.1 Gene:GPC6 / 10082 HGNCID:4454 Length:555 Species:Homo sapiens
Sequence 2:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster


Alignment Length:606 Identity:143/606 - (23%)
Similarity:228/606 - (37%) Gaps:110/606 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    24 DVKARSC--GEVRQAYGAKG-FSLADIPYQEIAGEHLRICPQEYTCCTTEMEDKLSQQSKLEFEN 85
            |.:|:..  |...|....|. |...||.......|...||..  .||....|.:|..::...||.
  Fly    55 DSRAKDAVGGSTHQCDAVKSYFESIDIKSSGTYSEKGAICGG--NCCNNATELELRDKAAGMFEQ 117

Human    86 LVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSLNDMFVRTYGMLYMQNSEVFQDLFTELKRY- 149
            |:...:..:|....:..|:|.....||.:.:|...:.:|.:.|..:...:..:...|:||:..: 
  Fly   118 LLHHHTSSLRGVLETNAKQFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHL 182

Human   150 -----YTGGN------------VNLEEMLNDFWARLLERMF-QLINPQYHFS--------EDYLE 188
                 ||..|            .||||.:..|:.:|....: |::    |.|        |||:.
  Fly   183 IYTSNYTNSNGQLGRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMV----HLSKNNLGDLHEDYVN 243

Human   189 CVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKV---SPTPGCIRALMK 250
            |:....|::.||||:|::::..:.::...:..|:..|....||.:....:   ..|..|...|:|
  Fly   244 CLQHNFDEMHPFGDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHLLK 308

Human   251 MLYCPYCRG-----LPTVRPCNNYCLNVMKGCLANQAD-LDTEWNLFIDAM-LLVAERLEGPFNI 308
            |.|||.|.|     ....:.|..||.|||:||.|..|. ||:.|:..:|:: .||...:.....|
  Fly   309 MHYCPNCNGHHSSSRSETKLCYGYCKNVMRGCSAEYAGLLDSPWSGVVDSLNNLVTTHILSDTGI 373

Human   309 ESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAP---ALRSARSAPENFNTRFRPYNPE 370
            .:|:..:....|||||....|..::..||.:.||.|...|   ....||..|...|.::      
  Fly   374 INVIKHLQTYFSEAIMAAMHNGPELEKKVKKTCGTPSLTPYSSGEPDARPPPHKNNVKW------ 432

Human   371 ERPTTAAGTSLDRLVTDIKEKLKLSKKVWSALPYTICKDESVTAGTSNEEECWNGHSKARYLPEI 435
                   .|..|..:......:..||:.::.:....|.::.   .:.::..||:|.....|...:
  Fly   433 -------ATDPDPGMVLFLSTIDKSKEFYTTIVDNFCDEQQ---HSRDDHSCWSGDRFGDYTQLL 487

Human   436 MNDGLTNQINNPEV-----------------------DVDITRPDTFIRQQIMALRVMTNKLKNA 477
            :|.|..:|..||||                       .:....|.    ..|.|...:.|.:...
  Fly   488 INPGTDSQRYNPEVPFNAKAQTGKLNELVDKLFKIRKSIGAAAPS----NSIQATHDIQNDMGEG 548

Human   478 YNGNDVNFQDTSDE---SSGSGSGSGCMDDVCPTEFEFVTTEAPAVDPDRREVDS--SAAQRGHS 537
            ..|.:....|..:|   :.|||.|||........|.|..||         .||:|  |....|.:
  Fly   549 SGGGEGQIGDDEEEYGGAHGSGDGSGDGPHTPIEESEGTTT---------NEVESRDSGKTSGSN 604

Human   538 LL----SWSLTCIVLALQRLC 554
            .|    :|.|..:|..|...|
  Fly   605 PLEGTATWMLLTLVTMLFSSC 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPC6NP_005699.1 Glypican 22..548 CDD:307347 140/598 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..376 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 480..501 8/23 (35%)
dallyNP_001246685.1 Glypican 51..622 CDD:279494 141/601 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.