DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDH10 and CadN2

DIOPT Version :9

Sequence 1:NP_006718.2 Gene:CDH10 / 1008 HGNCID:1749 Length:788 Species:Homo sapiens
Sequence 2:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster


Alignment Length:776 Identity:205/776 - (26%)
Similarity:331/776 - (42%) Gaps:167/776 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    88 SLKYILSGDG------AGTLFIIDEKTGDIHATRRIDREE-----KAFYTLRAQAINRRTLRPVE 141
            ::.|.|:|.|      |.:.|.|:..||||...:.:||::     :..:|:.||......|   .
  Fly   172 NIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGL---V 233

Human   142 PESEFVIKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQ-- 204
            ..::..:.:.|||||.|.||:.||..:|.|....|:||:.::|.|.|||:...:|::||||.:  
  Fly   234 GYADIQVNLKDINDN
APQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNV 298

Human   205 -----GQPYFSVEPETGIIRTALPNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 264
                 |.|.|.:|||||:|:||:..::||....|.:.:.|.|    .|||.||.|.:|.:.|:||
  Fly   299 IEEETGAPIFEIEPETGLIKTAVCCLDRERTPDYSIQVVAMD----GGGLKGTGTASIRVKDLND 359

Human   265 NPPRFPQNTIHLRVLESSPVGTAIGS---VKATDADTGKNAEVEYRII--DGDGTDMFDIVTEKD 324
            .||:|.::.....|.|::  ||.|..   :..|..|..:....:|:::  .|.|.|.|.:|...|
  Fly   360 MPPQFTKDEWVTEVDETN--GTYIPETPILTVTVQDEDETNTFQYKVVPNSGFGADKFAMVRNGD 422

Human   325 TQEGIITVKKPLDYE---SRRLYTLKVEAENTHVDPRFYYLGPFKDT------TIVKISIEDV-D 379
             ..|.:.:.:|||||   ....:..:::..:...|      ||....      :.|.:.:.|: |
  Fly   423 -GTGSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDD------GPGGSDKYHVAYSWVVVKLRDIND 480

Human   380 EPPVFSRSSYLFEVHEDIEVGTIIGTVMARDPDSIS-SPIRFSLDRHTDLDRIFNIHSGNGSLYT 443
            ..|.|.|......::||.:||||:....|.|.|... |.:.:.:.|.|:..|.|.| |..|::..
  Fly   481 NVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAI-SDRGAVSI 544

Human   444 SKPLDRELSQWHNLTVIAAEINNPKETTRVAVFVRILDVNDNAPQFAVFYDTFVCENARPGQLIQ 508
            .:|||||....|::.::|.:..:|..|....:.|.:.|||||||.||..|...:.||. .|:.|.
  Fly   545 QRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTLPENV-SGKKIL 608

Human   509 TISAVDKDDPL--GGQKFFFSL-----AAVNPNFTVQ-----DNEDNTARILTRKNGFNRHEIST 561
            .::|.|.||.|  .|..|.|.|     ..:...|.|:     |||:..| |::....|:|....:
  Fly   609 EVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGDNENGVA-IISSLRPFDREAQKS 672

Human   562 YLLPVVISDNDYPIQSSTGTLTIRVCACDSQGNMQSCSAEALLLPAGLSTGALIAILLCIIILLV 626
            |.:|:.|.||..|..:.|.|||:.:                                        
  Fly   673 YAIPIEIKDNGAPAMTGTSTLTVTI---------------------------------------- 697

Human   627 IVVLFAALKRQRKKEPLILSKEDIRDN--------IVSYNDEGGGEE---------DTQAFDIGT 674
                                 .|:.||        ::.||.:|..::         |...:|:..
  Fly   698 ---------------------GDVNDNKMQPGSKSVLVYNYQGQSQDTPIGRVYVNDPDDWDVPD 741

Human   675 LRNPAAIEEKKLRRDIIPETLFIPRRTPTAPDNTDVRDFINERLKEHDLDPTAPPYDSLATYAYE 739
            .:....::|.: |..:..:|..:..|..|......:|..:.:|  ||..:      |..|..:..
  Fly   742 KKYYWEVQEHQ-RFKLDTDTGILTMRAGTRRGRYQLRFKVYDR--EHGQE------DIPANLSVT 797

Human   740 GNDSIAESLSSLESGTTEGDQNYDYLREWGP-----------RF-NKLAEMYGGGESDKDS 788
            ..|..||::....|.......:.|::|.|.|           || |||||:.   .:|:|:
  Fly   798 VRDITAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERFRNKLAELL---YTDRDN 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDH10NP_006718.2 CA 80..158 CDD:214520 22/80 (28%)
Cadherin_repeat 164..265 CDD:206637 42/107 (39%)
Cadherin_repeat 273..380 CDD:206637 25/121 (21%)
Cadherin_repeat 388..485 CDD:206637 30/97 (31%)
Cadherin_repeat 493..587 CDD:206637 33/105 (31%)
Cadherin_C 635..782 CDD:395833 34/175 (19%)
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637
Cadherin_repeat 140..248 CDD:206637 20/78 (26%)
Cadherin_repeat 256..359 CDD:206637 41/106 (39%)
Cadherin_repeat 379..481 CDD:206637 22/108 (20%)
Cadherin_repeat 489..586 CDD:206637 30/97 (31%)
Cadherin_repeat 594..703 CDD:206637 34/171 (20%)
Cadherin_repeat 724..801 CDD:206637 13/85 (15%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 <1233..1259 CDD:285248
Laminin_G_2 1293..1428 CDD:280389
EGF_CA 1497..1535 CDD:238011
Cadherin_C 1583..1719 CDD:279398
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 130 1.000 Domainoid score I5199
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.010

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