DRSC/TRiP Functional Genomics Resources

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Protein Alignment LOC100653049 and Krt34

DIOPT Version :9

Sequence 1:XP_003403930.1 Gene:LOC100653049 / 100653049 -ID:- Length:436 Species:Homo sapiens
Sequence 2:NP_001008758.1 Gene:Krt34 / 303528 RGDID:1306530 Length:391 Species:Rattus norvegicus


Alignment Length:389 Identity:345/389 - (88%)
Similarity:367/389 - (94%) Gaps:0/389 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    43 MSYSCCLPSLGCRTSCSSRPCVPPSCHGYTLPGACNIPANVSNCNWFCEGSFNGSEKETMQFLND 107
            ||...|||:|.|||||||||||||||||.||||||||||||.||||||||||||:||||||||||
  Rat     1 MSCESCLPALSCRTSCSSRPCVPPSCHGCTLPGACNIPANVGNCNWFCEGSFNGNEKETMQFLND 65

Human   108 RLASYLEKVRQLERDNAELEKLIQERSQQQEPLLCPSYQSYFKTIEELQQKILCAKAENARLVVN 172
            |||||:||||||||:|||||..||||||||:||:||:||:||:|||||||||||||:|||||||.
  Rat    66 RLASYIEKVRQLERENAELESRIQERSQQQDPLVCPAYQAYFRTIEELQQKILCAKSENARLVVK 130

Human   173 IDNAKLASDDFRSKYQTEQSLRLLVESDINSIRRILDELTLCKSDLESQVESLREELICLKKNHE 237
            ||||||||||||:|||||.|||.||||||||:|||||||||||||||:|||||||||:|||||||
  Rat   131 IDNAKLASDDFRTKYQTELSLRQLVESDINSLRRILDELTLCKSDLEAQVESLREELLCLKKNHE 195

Human   238 EEVNTLRSQLGDRLNVEVDTAPTVDLNQVLNETRSQYEALVETNRREVEQWFATQTEELNKQVVS 302
            |||||||.|||||||||||.|||||||:||||||.||||||||||||||:|:.||||||||||||
  Rat   196 EEVNTLRCQLGDRLNVEVDAAPTVDLNRVLNETRCQYEALVETNRREVEEWYTTQTEELNKQVVS 260

Human   303 SSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTLTESEAHYSSQLSQVQSLITNVESQL 367
            |||||||||||||||||||||||||||||||||:|||||||||||.|||||||||.|||||||||
  Rat   261 SSEQLQSCQAEIIELRRTVNALEIELQAQHNLRNSLENTLTESEARYSSQLSQVQCLITNVESQL 325

Human   368 AEIRCDLERQNQEYQVLLDVRARLECEINTYRSLLESEDCKLPCNPCATTNASGNSCGPCGTSQ 431
            .|||.||||||||||||||:|:||||||||||||||||||.|||||||||||||..|||||:|:
  Rat   326 GEIRADLERQNQEYQVLLDIRSRLECEINTYRSLLESEDCNLPCNPCATTNASGGCCGPCGSSR 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LOC100653049XP_003403930.1 Filament 97..408 CDD:306535 278/310 (90%)
Krt34NP_001008758.1 Filament 55..366 CDD:278467 278/310 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
HGNC 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 701 1.000 Inparanoid score I8778
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG43111
OrthoDB 1 1.010 - - D117946at9347
OrthoFinder 1 1.000 - - FOG0000094
OrthoInspector 1 1.000 - - oto128946
orthoMCL 1 0.900 - - OOG6_110666
Panther 1 1.100 - - O PTHR23239
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4881
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.980

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