Sequence 1: | XP_024304052.1 | Gene: | NR1H3 / 10062 | HGNCID: | 7966 | Length: | 511 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
Alignment Length: | 520 | Identity: | 173/520 - (33%) |
---|---|---|---|
Similarity: | 246/520 - (47%) | Gaps: | 131/520 - (25%) |
- Green bases have known domain annotations that are detailed below.
Human 51 GGTAGVGLE---AAEPTALLTRAEPPSEPT----------EIRPQKRKKGPAPKMLGNELCSVCG 102
Human 103 DKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREEC 167
Human 168 VLSEEQIRLKK--LKRQEEEQAHATS------------------------------LPPRASS-- 198
Human 199 --PPQIL--------PQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHSREARQQR 253
Human 254 FAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVAGEGQGMKGEAEWDYLWEGPP 318
Human 319 DIELGEPNLLGSRDEENRPPWKRPCSKTSPPSPRLRFAACVQVMLLETSRRYNPGSESITFLKDF 383
Human 384 SYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHT 448
Human 449 YVEALHAYVSIHHPHDRL---MFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVH 510
Human 511 510 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NR1H3 | XP_024304052.1 | NR_DBD_LXR | 78..178 | CDD:143534 | 62/99 (63%) |
NR_LBD_LXR | 210..509 | CDD:132752 | 90/301 (30%) | ||
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 57/89 (64%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 90/301 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165157559 | |
Domainoid | 1 | 1.000 | 129 | 1.000 | Domainoid score | I5254 |
eggNOG | 1 | 0.900 | - | - | E33208_3BAC4 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5451 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1137281at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005880 | |
OrthoInspector | 1 | 1.000 | - | - | otm41477 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_108995 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24082 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X4275 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.700 |