DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBM14-RBM4 and NOP13

DIOPT Version :9

Sequence 1:NP_001185774.1 Gene:RBM14-RBM4 / 100526737 HGNCID:38840 Length:339 Species:Homo sapiens
Sequence 2:NP_014224.2 Gene:NOP13 / 855547 SGDID:S000005119 Length:403 Species:Saccharomyces cerevisiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBM14-RBM4NP_001185774.1 RRM1_CoAA 1..71 CDD:241052
RRM_SF 79..>113 CDD:302621
ZnF_C2HC 136..151 CDD:197667
NOP13NP_014224.2 RRM1_Nop13p_fungi 127..217 CDD:409830
RRM2_Nop13p_fungi 241..316 CDD:409831
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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