Protein Alignment RBM14-RBM4 and rbm4.3

DIOPT Version :9

• Sequence 1: NP_001185774.1
• Gene: RBM14-RBM4 / 100526737
• HGNCID: 38840
• Length: 339
• Species: Homo sapiens
• Sequence 2: XP_005172323.1
• Gene: rbm4.3 / 406277
• ZFINID: ZDB-GENE-040426-1938
• Length: 362
• Species: Danio rerio
• Alignment Length: 385
• Identity: 122/385 - (31%)
• Similarity: 165/385 - (42%)
• Gaps: 106/385 - (27%)

Human     1 MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELRPGRA 65
            :|||:||:. .....:||.:||:.||||..||::|.||||||.:...|.:||:.||.::|. |..
Zfish    23 VKIFIGNLP-QQAEVDELKSLFSQYGTVTECAIIKNFAFVHMDDRKSATKAIKNLHLYKLH-GTP 85

Human    66 LVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVK------------------ 112
            :.||.||.:.....|:.|.||... |..|||:|||..|.|.||.::|
Zfish    86 INVEASRGKNQGPVKLHVANVEKG-TDDELRALFEDYGTVAECAIIKNFAFVHMNNSDEAMDAIK 149

Human   113 --------GKRMHVQLSTSRLRTAPGMGDQSGCYRCGKEGHWSKECPIDR-------SGRVADLT 162
                    |||:|||:|.||.|     |::.. |.....|:|....|.:|       .||
Zfish   150 GLDNTEFQGKRIHVQISKSRPR-----GEEDD-YGHPDAGYWPPRYPGERPEPPGYPRGR----- 203

Human   163 EQYNEQYG-------------AVRTPYTMSYGDSLYYNNAYGALDAYYKRCRAARSYEAVAAAAA 214
                  ||             ..|:||......:  |......:| ||::.| ||.| .||
Zfish   204 ------YGYPPGPPPPPPPPPPRRSPYPDRAAPA--YERQRDVVD-YYEKYR-ARPY-GVA---- 253

Human   215 SVYNYAEQTLSQL----PQVQNTAMASHLTSTSLDPYDRHLLPTSGAAATAAAAAAAAAAVTAAS 275
                |.::....:    |...:..|...:....||||:|..||...|
Zfish   254 ----YDDRRPGGIPPPPPPPSSAIMRDRMPGNGLDPYERRPLPPPPA------------------ 296

Human   276 TSYYGRDRSPLRRATAPVPTVGEGYGYGHE-SELSQASAAARNSLYDMARYEREQYADRA 334
             |:|.|||||:||| .|.|....|.||.:| |.||..| .:|..:|.:.| .|:.|||||
Zfish   297 -SFYARDRSPIRRA-PPAPPAPAGNGYSYERSRLSPVS-MSRAPMYSVPR-PRDPYADRA 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RBM14-RBM4	NP_001185774.1	RRM1_CoAA	1..71	CDD:241052	31/69 (45%)
		RRM_SF	79..>113	CDD:302621	16/59 (27%)
		ZnF_C2HC	136..151	CDD:197667	3/14 (21%)
rbm4.3	XP_005172323.1	RRM_SF	23..89	CDD:302621	29/67 (43%)
		RRM_SF	100..164	CDD:302621	20/64 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0109
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
NCBI	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23147
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.910