Protein Alignment RBM14-RBM4 and SPBC660.15

DIOPT Version :9

• Sequence 1: NP_001185774.1
• Gene: RBM14-RBM4 / 100526737
• HGNCID: 38840
• Length: 339
• Species: Homo sapiens
• Sequence 2: NP_595094.1
• Gene: SPBC660.15 / 2541150
• PomBaseID: SPBC660.15
• Length: 474
• Species: Schizosaccharomyces pombe
• Alignment Length: 357
• Identity: 79/357 - (22%)
• Similarity: 131/357 - (36%)
• Gaps: 90/357 - (25%)

Human     2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ--------FAFVHMRENAGALRAIEA---- 54
            |:|:|.::. :||.:.|...|..:|.|:.|.||:.        |.|:..: |...:..:.:
pombe   164 KMFIGGLNW-ETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFK-NPKCVNEVMSKEHH 226

Human    55 LHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKGKRMHVQ 119
            |.|..:.|.||:    .|.....|.|:|||.|...||.:|.|:.|.:.|||::..::..|
pombe   227 LDGKIIDPKRAI----PREEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDK----- 282

Human   120 LSTSRLRTAPGMGDQSGCYRCGKEGHWS--------KECPIDRSGRVADLTEQYNEQ---YGAVR 173
             .|.|.|   |.|..:.......|...|        |...:.|:...|.|.:.::..   |....
pombe   283 -DTGRPR---GFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPKASLRDSHDRHQHGYHGNA 343

Human   174 TPYTMSYGDSLYYNNAYGALDAYYKRCRAARSYEAVAAAAASVYNYAEQTLSQLPQVQNTAMASH 238
            .||   |..::   |.||.:               ..|..|..|...:|.:.        ||.:.
pombe   344 NPY---YAQNM---NMYGGM---------------TPAMMAQYYRQMQQYME--------AMRNM 379

Human   239 LTSTSLDPYDRHLLPTSGAAATAAAAAAAAAAVTAASTSYYGRDRSPLRRATAPVPTVGEGYGYG 303
            ..:....||.:.::| :|.|.........||        |:  |.|.:.:.|      |:|..:.
pombe   380 PAAAGAVPYPQPVMP-AGMADWQQQQQQGAA--------YF--DPSKMNQGT------GDGVPFS 427

Human   304 HESELSQASAAARNSLY--DMARYEREQYADR 333
            .    |..|.::|...:  :.....|::|..|
pombe   428 P----SMPSGSSRGGYHGRNPGGPNRQRYRGR 455

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RBM14-RBM4	NP_001185774.1	RRM1_CoAA	1..71	CDD:241052	20/80 (25%)
		RRM_SF	79..>113	CDD:302621	13/33 (39%)
		ZnF_C2HC	136..151	CDD:197667	3/22 (14%)
SPBC660.15	NP_595094.1	RRM1_Hrp1p	165..240	CDD:241021	19/80 (24%)
		RRM2_Hrp1p	248..322	CDD:240776	22/82 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910