DRSC/TRiP Functional Genomics Resources

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Protein Alignment chd6 and kis

DIOPT Version :9

Sequence 1:XP_004918574.2 Gene:chd6 / 100498254 XenbaseID:XB-GENE-5964535 Length:2667 Species:Xenopus tropicalis
Sequence 2:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster


Alignment Length:3528 Identity:1067/3528 - (30%)
Similarity:1494/3528 - (42%) Gaps:1150/3528 - (32%)


- Green bases have known domain annotations that are detailed below.


 Frog    62 NVLYPDSGQEECLAVEATSINGMENSGGGGTGVKKKRKKKEP--------------------GEE 106
            |.:|.::|.|:.:.|:......|    |....:..|.|:|.|                    |:|
  Fly  1633 NYVYINTGDEDSMVVQLVLAMRM----GKRELILDKPKEKAPEPKQDEEKSELDEATTDKPEGDE 1693

 Frog   107 KVAKPKKKKEPKKVKEPKKVKEPSEAKDPKEQKQPKSPKEPKKPRK--------------PREPK 157
            |.....:.|:.....|..|::..:...|.||:.:|...|:..:..|              .:|.|
  Fly  1694 KFKTEGESKKDLTDSEETKLESSAMEVDSKEESEPDDSKKSDEDNKDKDKMEVDDEVGKSDKESK 1758

 Frog   158 PPKQK---KANQDSAAKTKPKK---LSKEQGPTP---LEKKKKGKR---------KAEFSEE-SL 203
            |.:|.   |..::|.|..:.|.   |:.:....|   |||.:..::         |||.|:| |.
  Fly  1759 PEEQSETVKTEENSKAIEEDKSSTVLTADHAKEPETVLEKMEVDEKANDDQSAVSKAEGSDEKST 1823

 Frog   204 DGEPSLLNPASQSTEESTESLDSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRASALS 268
            |..    ||...:||::.|||:.:..:     :|.|..|:...|..|:..|.             
  Fly  1824 DDS----NPEEATTEKNKESLEIEGEK-----ERVKEGEESVKKENDEKTEA------------- 1866

 Frog   269 ASTLAWQAEEPPEDDANIIERILSSRISQKEFMHAGIPLEVEEFYVKYRNFSYLHCKWATLEELE 333
                  ..|..||.                      :.::|||::|||||||||||:|.|.|||.
  Fly  1867 ------DMENKPEP----------------------VFIDVEEYFVKYRNFSYLHCEWRTEEELL 1903

 Frog   334 K-DPRIQQKIKRFRNKQAQMKHIFTEPDEDMFNPDYVEVDRVLEVAHTKDSDTGEVREVTHFLVK 397
            | |.|:..||:||:.||:|..:||...:::.||.|:.||||||:::...|..:||..:  |:|||
  Fly  1904 KGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFTEVDRVLDMSVHTDETSGETTK--HYLVK 1966

 Frog   398 WCSLPYEESTWELEEDVDPVKVKEFEALQKVP---DLTPMERPASETWQKLVSSRTYKNNNQLRE 459
            |.|||||:.|||||||||..|::::....|:|   :....:||..|.|:||..:..||..|.||.
  Fly  1967 WKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKGGNSLRP 2031

 Frog   460 YQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFFMGIRGPFLIIAPLSTITNWEREF 524
            |||||:|||.|:|||..||||||||||||||||:||:..::..|||||||:|||||||.||:|||
  Fly  2032 YQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREF 2096

 Frog   525 RTWTEMNTIVYHGSQISRQMIHQYEMYYRDEQGTPIPGIYKFQIVITTFEMILADCPELKKIRWS 589
            ..||:||.:|||||..|:|||..||.||:.|.|..:....||.::|||||||:.|..:||...|.
  Fly  2097 EGWTDMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTDYMDLKAFNWR 2161

 Frog   590 CVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELYSLLNFLEPVQFPSESTFLEE 654
            ..:||||||||||||||||||:.:.|||:|||:||||||::.||:||||||||.||.|:..|:.|
  Fly  2162 LCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSE 2226

 Frog   655 FGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFTFLT 719
            ||.|:|||:|.|||::|||||||||||||||:||||:|||||||||||||||||.|||:||:||.
  Fly  2227 FGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLK 2291

 Frog   720 KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKRHSPDALDFQLQAMIQAAGKLVLI 784
            ||....|:|||:||||||||||.||||:|||||:|..||:.:|..|...: .:.:|.:|||:|||
  Fly  2292 KGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESY-YKNLILSAGKMVLI 2355

 Frog   785 DKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYIYERIDGRVRGNLRQAAIDRFCKPDSDRF 849
            |||||||.|.||:||||||||||||||||||:.|:|.:||||||:||||||.||||:.||.||||
  Fly  2356 DKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRF 2420

 Frog   850 VFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 914
            ||||||:|||||||||||||.||:|||||||||||||||||||||.|.||:|||:.||:||||||
  Fly  2421 VFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMF 2485

 Frog   915 DKASLKLGLDKAVLQDINRKGNTNG-VQPLSKIEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQI 978
            ||||:||||||||||.:|.:|:.:| .:.|||.|:||||:||||||:||:::.|.||||||||.|
  Fly  2486 DKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSI 2550

 Frog   979 LQRRTQTITIQSEGKGSTFAKASFVSSGNRTDISLDDPNFWQKWAKIAELDTDA--RNEKESLVL 1041
            |:||||.||::|| |||||:||||.:||||:||::|||:||.||||..::|.||  |:|.|.|||
  Fly  2551 LKRRTQVITMESE-KGSTFSKASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVL 2614

 Frog  1042 DRPRVRKQTKHYNSFEDDELMEFSELESDTEERP------TRSRRLNDKTRR------------- 1087
            ..||.|.|.|.|.   .:::||.:..||..|...      .||||..:|..|             
  Fly  2615 SEPRRRTQIKRYG---HEDVMELNSEESSNENSDEEGGIGLRSRRRKEKRDRAREKKGNDEYIPR 2676

 Frog  1088 -----------------YLRAECFRVEKNLLIFGWGRWKDILNLGRFKWHLNEKDMEMICRALLV 1135
                             :.::|||:|||.||.||||||.::|.||:||....:.|:|...|.:|:
  Fly  2677 ERDALAALGLEEIQYGNWAKSECFKVEKGLLSFGWGRWSELLELGQFKRGWRDVDVEDCARIILL 2741

 Frog  1136 YCVKHYKGDEKIKSFIWDLITPTKDGHNQAL-QNHSGLSAPVPRGRKGKKLKNQM---------- 1189
            ||::.||||||||:|||||||||:||..|.: ::||||...|||||.|.|...:.          
  Fly  2742 YCLQVYKGDEKIKTFIWDLITPTEDGEVQKISRDHSGLHNLVPRGRNGGKSNKESTGVSTPAPGS 2806

 Frog  1190 --------LLPEIK--------------NADWLASCNPEIVLHD-----------------DSYK 1215
                    ..|..|              ||..:|:....|  ||                 .:||
  Fly  2807 ASGSNSGNTTPAHKSSALDGSDKDSGGINASAVAAAVTSI--HDPNHWSKKEKYDADAYLEGAYK 2869

 Frog  1216 KHLKQHCNKVLLRVRMLYYLKAEVLGEAASRALEGENARDLEVL---LPDIDYVEIPVDWWDTE- 1276
            |||.:|.||||||||||||::.||:|:...:..:.....:|.:.   .||    ::|..||:.. 
  Fly  2870 KHLGRHANKVLLRVRMLYYIQHEVIGDFVQQIKDNTPISELPIRPPPTPD----QVPSSWWNPIC 2930

 Frog  1277 ADKSLLLGVYKHGYERYFAMRADPALCFLDKVG------------MP------------------ 1311
            .|||||:|.||||.|.|..|||||.|||:..||            :|                  
  Fly  2931 CDKSLLVGTYKHGCEMYRQMRADPNLCFVTHVGAGAAGDDLAVTSLPINEDDANSKHDDGDEVDD 2995

 Frog  1312 ---------DETSLT------------------------ADGVND-------------------- 1323
                     |.|.||                        |.|.||                    
  Fly  2996 DGTTTTKDSDSTKLTGGDNKDSLLDPERPSSSGKSSSENASGGNDKTESENDATTVSESSYKSEV 3060

 Frog  1324 -------------------VAPELGDGSAIKEENNEEKVNE-----------------------Q 1346
                               ..|||.:.|..|...|:.:|:.                       |
  Fly  3061 LPGKGSDLDVSVAQQDALSATPELANTSDPKMNKNDAQVSASVSCDPADSSSPEAAGKAQGTGVQ 3125

 Frog  1347 QEDASESTGKEEKADEESSIVENIQAQDSP--------------EADKLS--------------- 1382
            ..||.|...:.||.|.|....|:  ..|:|              |.||..               
  Fly  3126 TGDAGELDIESEKKDNEKETKES--TGDAPAVEAKKDSAAIARAEGDKTESCTNNATTNISTTTT 3188

 Frog  1383 -----------------------------------------------------------WPVASA 1388
                                                                       ||....
  Fly  3189 TTTITNTTTTTNNPSSKAANSNNTTDHANSNSHLGLDEEESVAGSYPPTVAAVEDATTMWPSMQD 3253

 Frog  1389 LTARLRRLITVYQRCNRRD------LARPEVLV-----------PTNHSYWLQ------------ 1424
            |..||||:||.|||..:::      .|:.:.||           ||..|..:|            
  Fly  3254 LNTRLRRVITAYQRNYKKEELKLQQKAKLQALVSSTPPLSVPTTPTLQSMQMQLQSGSGSGGSGI 3318

 Frog  1425 ----------------------------------------------------------------- 1424
                                                                             
  Fly  3319 GSSAQHDASGRSLQALMQSQGASTSAAAAAAASSAGGSCSGSGQVGMGGAGVMPAMPTAADISLM 3383

 Frog  1425 ----------------------------EEMARRAEMDPIMKEMQ--------KRWTRREQADFY 1453
                                        .:|.|:.:|:...||.:        |:|.|||:.:|.
  Fly  3384 LSILNTTDVNQLANLDINKLAMYLVSMNNKMERQGKMELAAKERESQRLQLIPKKWNRREEYEFL 3448

 Frog  1454 RTVSSFGV---IYDP------EKKCFDWTQFRALSRLDKKTDESLEKYFHSFVAMCRNVCRLPLR 1509
            |.::.:||   :..|      .....|||:|:.::.|::|:||:|..|:..|||||:....|.|.
  Fly  3449 RVLTGYGVDLHVSTPMASSNGSSLSPDWTKFKQMAHLERKSDETLTDYYKVFVAMCKRQAGLKLS 3513

 Frog  1510 KDDGSADPSLFLDPITEERAARTLYRIELLRKVREQVLRHPQLHDRLKLCRPSLYLPVWWECGKH 1574
            :.:...:.  .::.|.:|.|...|.|:|:|.|:|| |.|:|.|.:|||||..:...|.|||.|:|
  Fly  3514 ESERGLEG--IIEEIEKEHAKLILDRLEVLAKLRE-VARNPMLEERLKLCTKNADTPDWWEPGRH 3575

 Frog  1575 DRDLLIGTAKHGLSRTDYYIMNDPQLSFLDAYRNYAQNKRNSGENMCYHFQMNSKVQETPSCHLE 1639
            |::|:....||||.|::.:|.|||..||.::.:.:.:             ::.:::|.|......
  Fly  3576 DKELITAVLKHGLYRSETFIFNDPNFSFGESEKRFIR-------------ELEAQIQRTIKLEAF 3627

 Frog  1640 RTCESTKL-KPEKDIKTEVEEATTSNQMCSPPDLTCENFISQVGDMISNNHDECSMSDSLMCMIC 1703
            ...::.|| ..|||..|  |:|..:.:..:....:.:|.:..:.|.:..|..           :.
  Fly  3628 NAEKAEKLAAAEKDAAT--EKAAATEKAAAEKAASVKNEVIDLDDELMTNES-----------VI 3679

 Frog  1704 DEKTCNSALLDASNSEQSSLTQESFLGLEAKNGPTDYSLN-KAKEDNILP-------VEESV--- 1757
            .:::..:.:.:...||:|....::...||.||...:.|.. |.||| ..|       ::||.   
  Fly  3680 KKESPVTPIKEEIKSEESPEKHDTADNLEDKNSDAEESTKIKGKED-FNPETTEKEALDESTNLN 3743

 Frog  1758 ----SRDCFLGSSEKDEPMEGIDRINE-PFGDSGSHLGLAAEDCEKAQVDAIGQRDLDDDNFCTS 1817
                |.:..:...|..:|.|....:.| |..::|...| :.|.|..|:                 
  Fly  3744 KDKSSTETLVPEIEDSKPSEDKMEVEELPVAENGEKEG-SPEKCSDAE----------------- 3790

 Frog  1818 LSQTAEQSLGLDLEFLDKTFGDHSALSPGINE--------DKDCGITGEHSEGPHLNPMPVQEKE 1874
                            ||.|.:....||.:.:        |:....|.|:..|...:|    |||
  Fly  3791 ----------------DKKFSEEKPSSPAVPDGKVSEMEADEAAPNTEENCSGDSESP----EKE 3835

 Frog  1875 EWGADLQELKEDPIVKWQNELNDMKDPPLEDVIKDHKLEDLSIEKDSSTSKGSYGIPSLQVNECL 1939
            .....:::::|:   |.:|.....::...|    ..|||..|||.:.|.                
  Fly  3836 CEDKVVEKVEEE---KGENSYEKAEEQKEE----TEKLEKSSIESEPSE---------------- 3877

 Frog  1940 DMKHKTSLMLSGLLKQKVEDLKERIAGENVLEESNVPLEENETIKLEECEVKKEVKKESVEEECN 2004
              |.:|      :|:.:|...|:....:::|:....|.:.::.      ||.|| |:::||||| 
  Fly  3878 --KSET------VLEPEVAVPKKSTGDQDILDLVAGPSDPDDD------EVMKE-KEKAVEEEC- 3926

 Frog  2005 CKDYLDKYTEDDVKACPLSVPEESHQDFQDGRAPTIAQLLQEKTLYSFS--EWPKDRVIINRIDN 2067
                  |....::||        ...|.:..:..|:.|...||......  .|.||..:..||.:
  Fly  3927 ------KKQAAELKA--------RFPDLEVIQPATVKQQKLEKPKLEMCMIRWFKDFALERRIAH 3977

 Frog  2068 ICHAVLKGKWPSSSQQFE-AQCMVPSSV----------LSTCTRSSSYP---------------- 2105
            |...|..|.||..|:... |.|...:.:          ||:..|.|:.|                
  Fly  3978 IVACVESGNWPVDSKYSAFATCKGATDLSIALHESIPHLSSLERRSTTPDVITITTDQGVTKHLQ 4042

 Frog  2106 ------AEAQSIAYSNGSPVPQ-AQKEPLSAATFPNEE--------------------------- 2136
                  ..:.:.|.|..|.||| .|.:|.|:.:.|..:                           
  Fly  4043 TSHMQQVASSASAASTSSGVPQVTQSKPSSSNSLPGLDAKSINAAVAAAVAAAAAGGNATSLSSL 4107

 Frog  2137 ------------------------------RKHRRPFEFDSERQDGKLRGL-------------- 2157
                                          :|.:|....|.|.:..||..|              
  Fly  4108 LPGMSLSAATGSSAGGVSGLSVPSAGSGVGKKRKRHIAIDVETERAKLHALLNSSTMAPKDWESE 4172

 Frog  2158 ----EHLSPSHGR----TNSALNGWRDAA----IELCREQAAGGGSSYP----MNTSTPKIAGIG 2206
                |.||.|.||    .:||.:|.:...    ..|.|:  :.|..|.|    |.|..|.:....
  Fly  4173 IANMEALSGSSGRGRGGNSSASSGMQPPPAHQHASLSRQ--SSGQFSKPAVPAMKTPPPSMGAPM 4235

 Frog  2207 GLQSSL----------------GMDLSGILQAGL------IH-------PVTG------QIVNGS 2236
            .|.|||                .:|||.:....:      :|       |..|      ..:|..
  Fly  4236 DLSSSLPKMNMTEMLKSASSSGAIDLSEVQDFSMPSKKSSVHAALSSAFPSMGNKSKLDDTLNKL 4300

 Frog  2237 LRRDESSLRR----RRGRRKNVEGMDLGF--------LKDRGMHAG------------------- 2270
            ::::..::..    :..:||.::.:.||.        ..|..:.:.                   
  Fly  4301 MKKNNCTIEEPVIGKEKKRKKLDEIVLGLSAAKEQKTFPDPSLPSSKKPQIPPSVSVTPANLQSS 4365

 Frog  2271 ----------ILGLREVPNQLGSGHTESSL----SASARSGVPG--------------------- 2300
                      .:.:..||.:..||.:.|..    |:||..|..|                     
  Fly  4366 SNQQSNQKPFTITVTTVPGKSKSGSSNSGSGTGGSSSASGGGAGGSGLSALQNMAMGGLSSKDSL 4430

 Frog  2301 --------------------------------------AKFQPEKVISNK---------SLLEWL 2318
                                                  |:.:....||:|         .:.:||
  Fly  4431 NALLAQTMATDPQTFLKQQQKMMQFLPPAQRKAYENMLAEMEQAMKISSKFSTNSPHDVKVNKWL 4495

 Frog  2319 RQQSDCT--------IDIPTYGG-SFSDKPKPRR----------------------------QRC 2346
               ||.|        ||....|| |.|.....||                            |:.
  Fly  4496 ---SDMTSPLGDQLSIDYVGGGGASGSGSGNSRRSNRQQGNSQQSSSAAQLQKQQQQQQQQQQQQ 4557

 Frog  2347 KEPSKPEFSLLAGDDRVSLVNKDTGQQ--------------------GFLPESKFGRALPEPLMH 2391
            ::.|.|....|.|::.|.::||.||::                    .:..:.|:...:..| |.
  Fly  4558 QQHSMPGPQNLTGEEPVPVINKQTGKRLGGNKAPQLKRLMQWLTENPNYEVDPKWLEQMQNP-MS 4621

 Frog  2392 ETMPR--------------RRGRRPRSELLKSTGTM--------------GSDSSSGMGPLFMNG 2428
            ...||              ..|.||.|.|..::.:.              |:..||.........
  Fly  4622 TPSPRPASMESGYGSSAVKSHGGRPLSNLSSTSSSSHTQQQSSAAQSQAGGNSGSSKKNSRQQTA 4686

 Frog  2429 LIAGMDIVGLQNMRNMQGIPLTGLVGFPAGFTAVSTNEEMKS------TLSMLPMMLPGMAAMP- 2486
            ..|.:|...|| ..::.|:..:.|...| |..|......:.:      .|||....:|||..:| 
  Fly  4687 ASAALDQAALQ-FGSLAGLNPSLLANLP-GLGAFDPKNPLAAFDPKNPLLSMSFGGMPGMGNIPG 4749

 Frog  2487 -----------QMFGVGGIIN----------SPMATSVPTSLGSTIKSGSSHPDK--------AT 2522
                       .:.|:||:.|          :.||.:.||..|.|..||.:...|        ||
  Fly  4750 LGNLNNMNLFASLAGMGGLGNLAGMDTQSLAALMAAAGPTLGGLTGASGGAGSGKSQAQSQSSAT 4814

 Frog  2523 EDKDACPETKPD--------------TAPSDKPSGSFQEKSEPAVTTSSPVAFN-PFLIPGMSPS 2572
            ....:..:.|..              .|.|....||.....:.|..::|.:|.. |||.|  :||
  Fly  4815 SSSSSASKKKQQQQQQQAQNEAAQLAAAISASTGGSGASGGKNAAASASQLAAGFPFLFP--NPS 4877

 Frog  2573 LLYPSMFLSPGIGMAIPGVQPNRLSESG---GIDHQRRRRKKTKGETQTSEQETVPFTESTESER 2634
            ||||.|    |:|    |:.|..|..||   ..|...::.....|.|.::..     |.||:|:.
  Fly  4878 LLYPPM----GLG----GLNPYSLGSSGLGSAYDQLAQQYNLLNGATSSASN-----TSSTQSKS 4929

 Frog  2635 LSPEAQNCDTDNTPAPEN 2652
            ...::::..:.||.|..|
  Fly  4930 HQSQSKSSQSRNTTASAN 4947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chd6XP_004918574.2 CD1_tandem_CHD5-9_like 281..347 CDD:349315 27/66 (41%)
CD2_tandem_CHD5-9_like 366..426 CDD:349310 30/59 (51%)
PLN03142 456..>981 CDD:215601 370/525 (70%)
DEXHc_CHD6 457..678 CDD:350816 144/220 (65%)
kisNP_001137761.1 BASP1 1554..1786 CDD:283191 32/156 (21%)
HepA 1676..2527 CDD:223627 473/903 (52%)
SDA1 <1693..>1854 CDD:283052 40/169 (24%)
CHROMO <1879..1919 CDD:237991 26/39 (67%)
Chromo 1941..1996 CDD:278797 29/56 (52%)
DEXDc 2048..2197 CDD:238005 94/148 (64%)
Helicase_C 2350..2464 CDD:278689 96/113 (85%)
RR_TM4-6 3728..>3877 CDD:283990 37/193 (19%)
BRK 4569..4613 CDD:197800 7/43 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 564 1.000 Domainoid score I232
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1491 1.000 Inparanoid score I105
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001075
OrthoInspector 1 1.000 - - otm47615
Panther 1 1.100 - - O PTHR45623
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X648
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.060

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