DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mbnl3 and mbl

DIOPT Version :9

Sequence 1:XP_012824887.2 Gene:mbnl3 / 100496456 XenbaseID:XB-GENE-999434 Length:387 Species:Xenopus tropicalis
Sequence 2:NP_001261046.1 Gene:mbl / 36945 FlyBaseID:FBgn0265487 Length:956 Species:Drosophila melanogaster


Alignment Length:450 Identity:165/450 - (36%)
Similarity:219/450 - (48%) Gaps:129/450 - (28%)


- Green bases have known domain annotations that are detailed below.


 Frog     9 RDTKWLTLEVCREFQRGTCSRSDAECKFAHPSRSCHVENGRVIACFDSLKIPSYSSFTPYIDGEL 73
            :|::||.|||||||||..|||.|.|||||||..:..|:||:|.||:||:|               
  Fly    14 KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACYDSIK--------------- 63

 Frog    74 MYWNISLIPRNSIGRCTREN--CKYLHPPPHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMLPGT 136
                         |||.|:.  |||.|||.|||.||.|||||:|..:..    |.|||. :.|| 
  Fly    64 -------------GRCNRDKPPCKYFHPPQHLKDQLLINGRNHLALKNA----LMQQMG-IAPG- 109

 Frog   137 QLQPITTFPVTPSLATSPSM------AFSPYLS--HVSPGMGLVPAELLPNTPVLVSGNPAVTVP 193
              ||:.:..| |::||:|.:      ::|||.:  |      ||||.|.|: ||.....|.|...
  Fly   110 --QPVISGQV-PAVATNPYLTGIPANSYSPYYTTGH------LVPALLGPD-PVTSQLGPVVPQT 164

 Frog   194 GGSAGQKLVRTDKLEVCREFQRGNCTRGENDCRYAHPID-IAMIDTNENTVTVCMDYIKGRCSRE 257
            ...|.||:.|:|:|||||||.||.|.|.|::||:|||.: :|..|  :.::|||||.:||||:|:
  Fly   165 VQVAQQKIPRSDRLEVCREFLRGACKRAESECRFAHPQESVARHD--DGSITVCMDAVKGRCARD 227

 Frog   258 KCKYFHPPAHLQAKIKAAQHQVNQTAAAA-----------MIQPAV-RSLKRPHKATLDLALQPG 310
            .|:|||||.||||::||||.:....||||           :.:|:: ..:|.......| ..|..
  Fly   228 PCRYFHPPLHLQAQLKAAQTRATAVAAAAAVWLYTIYFSILFEPSLCMDVKTVGSFYYD-NFQFS 291

 Frog   311 ALQPLPKRPALEKSNGATTVFNPSVFHYQQ---------------------------------AL 342
            .:.|. ||||.|||  ...|:.|....|||                                 .|
  Fly   292 GMVPF-KRPAAEKS--GIPVYQPGATAYQQLMQPYVPVSCEYPQQQQQPPPQQQQQQQHQQQNVL 353

 Frog   343 ANMQLQQPTFIPTVPMMHGATPTTVSA----------------ATTPATSVPFAATATAN 386
            ...|||..:.|.|       |.||.:|                |...:|::..:||.||:
  Fly   354 LQQQLQLSSVITT-------TSTTATASNNMINNNINNKGIINAVMASTNITSSATTTAS 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mbnl3XP_012824887.2 ZnF_C3H1 17..39 CDD:214632 17/21 (81%)
ZnF_C3H1 206..230 CDD:214632 15/23 (65%)
mblNP_001261046.1 ZnF_C3H1 175..201 CDD:214632 16/25 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H23101
Inparanoid 1 1.050 146 1.000 Inparanoid score I4320
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001679
OrthoInspector 1 1.000 - - otm48120
Panther 1 1.100 - - O PTHR12675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1238
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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