DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hspa2 and Hsc70-4

DIOPT Version :9

Sequence 1:XP_004917261.1 Gene:hspa2 / 100496396 XenbaseID:XB-GENE-992125 Length:633 Species:Xenopus tropicalis
Sequence 2:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster


Alignment Length:652 Identity:515/652 - (78%)
Similarity:573/652 - (87%) Gaps:23/652 - (3%)


- Green bases have known domain annotations that are detailed below.


 Frog     3 ANAPAVGIDLGTTYSCVGVFQHGKVEIIANEQGNRTTPSYVAFTDTERLIGDAAKNQVALNPANT 67
            :.||||||||||||||||||||||||||||:||||||||||||||||||||||||||||:||..|
  Fly     2 SKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQT 66

 Frog    68 IFDAKRLIGRRFDDPTVQADMKHWPFTVVSDGGKPKVKVEFKGENKTFFPEEISSMVLSKMKEVA 132
            ||||||||||:|||..||:|||||||.|||..||||::|.:|.|.|||||||||||||:||||.|
  Fly    67 IFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETA 131

 Frog   133 EAYLGVKVPNAVITVPAYFNDSQRQATKDAGVISGINVLRIINEPTAAAIAYGLDKKGAGHGETN 197
            |||||..|.||||||||||||||||||||||.|:|:|||||||||||||||||||||..  ||.|
  Fly   132 EAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAV--GERN 194

 Frog   198 VLIFDLGGGTFDVSVLTIDGGIFEVKSTAGDTHLGGEDFDNRMVAHFVEEFKRKNKKDISGNKRA 262
            ||||||||||||||:|:||.||||||||||||||||||||||:|.|||:|||||:|||::.||||
  Fly   195 VLIFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRA 259

 Frog   263 VRRLRTACERAKRTLSSSTQASLEIDSLYEGADFYTAITRARFEELCADLFRGTLEPVEKALRDA 327
            :|||||||||||||||||||||:|||||:||.||||:|||||||||.|||||.|::|||||||||
  Fly   260 LRRLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDA 324

 Frog   328 KLDKAQIREIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILSGDKSHNVQ 392
            ||||:.|.:||||||||||||||:||||.|||:|||||||||||||||||||||||.||||..||
  Fly   325 KLDKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQ 389

 Frog   393 DLLLLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQSSVLVQVYEGERAMTRDNN 457
            |||||||.|||||||||||||:.|||||||||:|||||||||||||..||:||||||||||:|||
  Fly   390 DLLLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454

 Frog   458 LLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKEDIERMV 522
            |||||:|:||||||||||||||||||||||||||||.::||.|||||||||||||||||||||||
  Fly   455 LLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMV 519

 Frog   523 NDAEKYKAEDELNRDRVAAKNGLESYAYHIKQTAEDEKLKGKLSEKEKSQILDKCKEVIDWLEKN 587
            |:||||:.|||..::.:|||||||||.:::|.|.:::.||.|:|:.:::.|||||.|.|.||:.|
  Fly   520 NEAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDAN 584

 Frog   588 QMAEKDEFEHKQKELEKVCNPIITKLYQG---------GAPN--PGTAG----------GPTIEE 631
            |:|:|:|:||:|||||.||||||||||||         |.|.  ||.||          ||||||
  Fly   585 QLADKEEYEHRQKELEGVCNPIITKLYQGAGFPPGGMPGGPGGMPGAAGAAGAAGAGGAGPTIEE 649

 Frog   632 VD 633
            ||
  Fly   650 VD 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hspa2XP_004917261.1 PTZ00009 2..633 CDD:240227 513/650 (79%)
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 498/611 (82%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 320/376 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D180577at33208
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X148
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.