DRSC/TRiP Functional Genomics Resources

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Protein Alignment pak6 and Pak

DIOPT Version :9

Sequence 1:XP_017952376.1 Gene:pak6 / 100495355 XenbaseID:XB-GENE-960331 Length:655 Species:Xenopus tropicalis
Sequence 2:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster


Alignment Length:824 Identity:250/824 - (30%)
Similarity:357/824 - (43%) Gaps:234/824 - (28%)


- Green bases have known domain annotations that are detailed below.


 Frog     3 RKKK--------------KKRPEISAPLNFQHRVHTSFDAKEGKFVGLPPQW------------- 40
            ||||              ..:|.||.|.||:|.||..|||..|:|.|:|..|             
  Fly    60 RKKKTLKSKIKGSKPSHTDSKPNISYPTNFEHTVHVGFDAVTGEFTGMPEAWARLLMNSNISKQE 124

 Frog    41 -----QNVLDTLR--------RPKPVVDPSRITQ------------------------------- 61
                 |.|||.|:        ||......:.||.                               
  Fly   125 QKKNPQAVLDVLKWFDNTTKQRPSSKYMTNAITTHSGSSLSRVSSSSPSSTPTDSELHGSNSGGN 189

 Frog    62 ---VQLKPMKTVVRGSTIGLEGYISG----------------LLHDIEK-----LSVISSNTLRG 102
               |||..|......:.:.:.|.|.|                |||....     :|...|....|
  Fly   190 LIGVQLGSMTLGPNANNVAVAGQILGNHYQQQQQHLLQQQQPLLHQNHNQHHMGISQSHSYNFVG 254

 Frog   103 SPLARRRAQSLGVLGEEKPLNGPFQIPEQIPSDKYGNYINCNGESKASRRQTMWPDYRPVED--- 164
            ..::...:|...  ..|..:.|| |.|:|.|...       ...|:..|.::::.  ||:||   
  Fly   255 HTVSSSTSQHSS--ANEDDMLGP-QHPQQQPPPP-------PVASRPERTKSIYT--RPIEDLQP 307

 Frog   165 ------------------NYCKPNGSVFKAKSLDPGDFQGTVDLMALSIPSPSSLQKAHIAS--- 208
                              |:..|.|                     :|.|:.|.:...:..:   
  Fly   308 AIIPMPVAPATTPATPLQNHRTPGG---------------------ISAPAASPMMHNNATTTLD 351

 Frog   209 KSFDEETPTSRQLSQI-----------------------------VPVSPR----EEGTAAKN-- 238
            |:.:..||||...::.                             .|.:||    |..||...  
  Fly   352 KNKNNATPTSPTTTKTTAETEGTDATSTLLSATNPSCSTTPTTDPAPAAPRGSLVETATAHATTA 416

 Frog   239 -----TDSTTKHKLLRGAF--VPSSRGQSVELLAPAQQIKSEALQGPSSSARG---VFAKAASLP 293
                 |.:||.|.....:|  .||.....    .....:.:.....|:||:|.   .|..|..||
  Fly   417 AATVATSTTTNHHSSASSFSSFPSFHDDD----GTHHALPTIHCPTPTSSSRNSTVSFPVAVPLP 477

 Frog   294 P----------NHLSPDF-------TRVISGAPSDSISPLRPCRPSPAGSPRSRPIQTSSTNLHL 341
            |          :..|||.       .:|.:|.||..::..:...|..|.:|.:.|          
  Fly   478 PIVTPASPTPASIESPDLYTPEPTVAQVSAGGPSSQVAGNQIAVPQAAVAPAATP---------- 532

 Frog   342 CTDTFGKTQLGNQESPVVTHEQFKTALRMVVDQGDPRQLLEDYVKIGEGSTGVVCIAREKHSGRQ 406
                  .|:..|.:...::.|:....||.:|..|||.:......|||:|::|.|..|.|..:|.:
  Fly   533 ------NTRAANAKKKKMSDEEILEKLRTIVSVGDPNRKYTKMEKIGQGASGTVYTAIESSTGME 591

 Frog   407 VAVKMMDLRKQQRRELLFNEVVIMRDYQHPSVVEMYKSYLVGEELWVLMEYVQGGALTDIVSQTR 471
            ||:|.|:|.:|.::||:.||:::||:.:||:||....||||.|||||:|||:.||:|||:|::|.
  Fly   592 VAIKQMNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETC 656

 Frog   472 LNEEQIATVCKSVLQALEYLHSQGVIHRDIKSDSILLTLDGRIKLSDFGFCAQISKDVPKRKSLV 536
            ::|.|||.||:.||||||:||:..|||||||||:|||.|||.:||:|||||||||.:..||.::|
  Fly   657 MDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSVKLTDFGFCAQISPEQSKRTTMV 721

 Frog   537 GTPYWMAPEVILRCSYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKA 601
            ||||||||||:.|..||.:||:||||||.||||:|||||.:::|::|:..:..:..|::|...|.
  Fly   722 GTPYWMAPEVVTRKQYGPKVDLWSLGIMAIEMVEGEPPYLNENPLKALYLIATNGKPEIKEKDKL 786

 Frog   602 SPILRDFLERMLVRDAAERATAQELLDHFFLLQAGLPECLVPLI 645
            |...:|||::.|..:...||:|.:||.|.||..|.....|.|||
  Fly   787 SSAFQDFLDQCLEVEVDRRASALDLLKHPFLKLARPLASLTPLI 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pak6XP_017952376.1 CRIB_PAK_like 10..55 CDD:238526 24/70 (34%)
STKc_PAK6 359..655 CDD:270821 147/287 (51%)
PakNP_001138013.2 PBD 83..137 CDD:279166 20/53 (38%)
STKc_PAK_I 558..818 CDD:270814 137/259 (53%)
S_TKc 566..817 CDD:214567 133/250 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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