DRSC/TRiP Functional Genomics Resources

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Protein Alignment pak3 and Pak

DIOPT Version :9

Sequence 1:XP_004916907.1 Gene:pak3 / 100495025 XenbaseID:XB-GENE-961764 Length:556 Species:Xenopus tropicalis
Sequence 2:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster


Alignment Length:848 Identity:367/848 - (43%)
Similarity:436/848 - (51%) Gaps:313/848 - (36%)


- Green bases have known domain annotations that are detailed below.


 Frog     8 EEKPPAPPLRMNSN---NRDSSA----------------LNHCSKPLPMAPEEKNKKARLRSIFP 53
            |:||||||:|:.||   |..|..                :....:|||..|::.::|        
  Fly     5 EDKPPAPPVRLTSNRGGNERSGGGVGVGGGGLGGGGMGDVPPDMRPLPKEPDDSDRK-------- 61

 Frog    54 GGGDKTNKKKEK--------ERPEISLPSDFEHTIHVGFDAVTGEFTGIPEQWARLLQTSNITKL 110
               .||.|.|.|        .:|.||.|::||||:|||||||||||||:||.|||||..|||:|.
  Fly    62 ---KKTLKSKIKGSKPSHTDSKPNISYPTNFEHTVHVGFDAVTGEFTGMPEAWARLLMNSNISKQ 123

 Frog   111 EQKKNPQAVLDVLKFYDSKETVN-NQKYM--------------------SFTSGDKSAHGYIAAH 154
            ||||||||||||||::|:..... :.|||                    |.|..|...||..:..
  Fly   124 EQKKNPQAVLDVLKWFDNTTKQRPSSKYMTNAITTHSGSSLSRVSSSSPSSTPTDSELHGSNSGG 188

 Frog   155 SLF------------------------------LSHVLQN----------------AKTASEPPL 173
            :|.                              ..|:||.                :::.|...:
  Fly   189 NLIGVQLGSMTLGPNANNVAVAGQILGNHYQQQQQHLLQQQQPLLHQNHNQHHMGISQSHSYNFV 253

 Frog   174 APPVSEEEDEEEEEEEDD---------NEPPPVIAPRPEHTKSIYTRSV--IEPVALTAPAKEAS 227
            ...||....:.....|||         ..|||.:|.|||.|||||||.:  ::|..:..|...| 
  Fly   254 GHTVSSSTSQHSSANEDDMLGPQHPQQQPPPPPVASRPERTKSIYTRPIEDLQPAIIPMPVAPA- 317

 Frog   228 TSPVTP---------------QPENSNSSTSTLYRN----------------------------- 248
            |:|.||               .|...|::|:||.:|                             
  Fly   318 TTPATPLQNHRTPGGISAPAASPMMHNNATTTLDKNKNNATPTSPTTTKTTAETEGTDATSTLLS 382

 Frog   249 -----------TD---------------------------------------------------- 250
                       ||                                                    
  Fly   383 ATNPSCSTTPTTDPAPAAPRGSLVETATAHATTAAATVATSTTTNHHSSASSFSSFPSFHDDDGT 447

 Frog   251 ----------------------------------------------------------------- 250
                                                                             
  Fly   448 HHALPTIHCPTPTSSSRNSTVSFPVAVPLPPIVTPASPTPASIESPDLYTPEPTVAQVSAGGPSS 512

 Frog   251 ------------------------RQRKKSKMTDEEILEKLRSIVSVGDPKKKYTRFEKIGQGAS 291
                                    ...||.||:|||||||||:|||||||.:|||:.||||||||
  Fly   513 QVAGNQIAVPQAAVAPAATPNTRAANAKKKKMSDEEILEKLRTIVSVGDPNRKYTKMEKIGQGAS 577

 Frog   292 GTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 356
            |||||||:.:||.|||||||||.|||||||||||||||||||:||:|||||||||.:||||||||
  Fly   578 GTVYTAIESSTGMEVAIKQMNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEY 642

 Frog   357 LAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC 421
            |.||||||||||||||||||||||||.||||:|||:||||||||||||||||:||||||||||||
  Fly   643 LPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSVKLTDFGFC 707

 Frog   422 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 486
            |||:||||||:|||||||||||||||||.||||||:|||||||||||||||||||||||:|||||
  Fly   708 AQISPEQSKRTTMVGTPYWMAPEVVTRKQYGPKVDLWSLGIMAIEMVEGEPPYLNENPLKALYLI 772

 Frog   487 ATNGTPELQNPERLSAIFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTPLIIAAKEAI 551
            ||||.||::..::||:.|:|||::|||::||||.||.:||:|||||||:||:||||||:|||||.
  Fly   773 ATNGKPEIKEKDKLSSAFQDFLDQCLEVEVDRRASALDLLKHPFLKLARPLASLTPLIMAAKEAT 837

 Frog   552 KNS 554
            |.:
  Fly   838 KGN 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pak3XP_004916907.1 PBD 69..124 CDD:279166 43/54 (80%)
STKc_PAK3 260..556 CDD:132987 247/295 (84%)
S_TKc 280..531 CDD:214567 211/250 (84%)
PakNP_001138013.2 PBD 83..137 CDD:279166 43/53 (81%)
STKc_PAK_I 558..818 CDD:270814 218/259 (84%)
S_TKc 566..817 CDD:214567 211/250 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 444 1.000 Domainoid score I528
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 649 1.000 Inparanoid score I787
OMA 1 1.010 - - QHG52925
OrthoDB 1 1.010 - - D425477at33208
OrthoFinder 1 1.000 - - FOG0000763
OrthoInspector 1 1.000 - - otm49514
Panther 1 1.100 - - LDO PTHR48015
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X799
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

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