Sequence 1: | XP_031755311.1 | Gene: | cacna1a / 100492135 | XenbaseID: | XB-GENE-1013831 | Length: | 2302 | Species: | Xenopus tropicalis |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
Alignment Length: | 2234 | Identity: | 497/2234 - (22%) |
---|---|---|---|
Similarity: | 868/2234 - (38%) | Gaps: | 702/2234 - (31%) |
- Green bases have known domain annotations that are detailed below.
Frog 2 ILATIIANCIVLAMEQHLPVGDKTPMSERLDDTEPYFIGIFCFETGIKIIALGFAFHKGSYLRNG 66
Frog 67 WNIMDFVVVLSGIVASTGPEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLL 131
Frog 132 FFAILIFAIIGLDFYIGKFHTSC-----YDMAGEDIREE---------------------VLCGN 170
Frog 171 DSSSRRCPENTQCLSKW-EGPNNGITQFDNILFAILTVFQCITMEGWTDILYYSNDVFGSAFNW- 233
Frog 234 -LYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFMK--LRRQQQIERELNGYMEWISKA 295
Frog 296 EVILAEDDSDIEQRLPYDGALRRPTI------------------KKNKTELLNAEEGEEAIG--- 339
Frog 340 --------------------DIASVGSPF--ARASIKSAKM------------------------ 358
Frog 359 ---------------------EN----------------SSY-MHK------------------- 366
Frog 367 -----KERRIR-------------------------------------------------FLIRR 377
Frog 378 MVKTQ-------------------------------AFY-------------------------- 385
Frog 386 ----------------WVVLGL------------VALNTLCVAIVHYGQDDRLSEFLYYAEFIFL 422
Frog 423 GLFMSEMFIKMYGLGTRPYFHSSFNCFDCAVITGSIFEVVWAMVKPGTSFGISVLRALRLLRIFK 487
Frog 488 VTKYWASLRNLVISLLS-SMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDEK-------TPAT 544
Frog 545 NFDTFPAAIMTVFQILTGEDWNAVMYDGIKSQGGVKTGMVFSI-YFIILTLFGNYTLLNVFLAIA 608
Frog 609 VDNLA----NAQELTKDEQEEEEAANQ--KLAMQKAKEVAEVSPLSATNMSIAAKEQQKNQKTSM 667
Frog 668 SVWEQRTNEIRRQNLMNSREALYSELDPEERWKLSFMRPDVKTHLDRPLVVDPQENRNNNTNKTR 732
Frog 733 PGEGRNPIEQRLSQQRAEDYLRKQARFQERGGRGYDMGQEPGRRPRIKEQDIIRDGQ-DLGMQDR 796
Frog 797 TGEMDGGIRPPQDPHRRHRGGGSKESRSGSPLPRGDGDHRRHRPHR----RTGEDNEDAGGGGGG 857
Frog 858 GGRGGGGGGDRRPRHGRDGMRVREGGGGESEGPEGERRRRHRHAAQSTYESDAKRDDRERRHRRR 922
Frog 923 KEPTAPTPGSGGPNLSTTRPIQDRSRQENQNQQPENMDNIRNTKLVTSEPPAGGGVGGLNHSPAK 987
Frog 988 IGNHTNCANNNSVPTGNATPRRTPHPTNSGPPPSAPDPSHTFSNPTETAKGTKTTEHTTVDIPPP 1052
Frog 1053 FPPPVENAIGQANKIVAVSPLPKKDDEKKEEEEDDDDGEKGPKPMPPYSSMFILSTTNPLRRLCH 1117
Frog 1118 YIVTMRYFEMCILMVIAMSSIALAAEDPVQPDAP-RNNVLRYFDYVFTGVFTFEMVIKMVDLGLI 1181
Frog 1182 LHQGAYFRDLWNFLDFIVVCGALVAFAFSSNQRGGSKGKDISTIKSLRVLRVLRPLKTIKRLPKL 1246
Frog 1247 KAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKEFQRDCRGEYLVYD--- 1308
Frog 1309 -KSEVKAQKREWKKWPFHYDNVLWALLTLFTVSTGEGWPDVLRHSVDATYEDQGPRPGFRMEMSI 1372
Frog 1373 F---YVVYFVVF-PFFFVNIFVALIIITFQEQGDKI---MEEYSLEKNER--ACIDFAISAKPLT 1428
Frog 1429 RHMPQNKQSFQYRMWQFVVSPPFEYTIMALIALNTIVLMMKFHGSSNTYENVLKTFNMVFTSLFS 1493
Frog 1494 LECLLKIMAFGAPNYFRDAWNIFDFVTVLGSITDIVVTELWDS-IINLSFLRLFRAA---RLIKL 1554
Frog 1555 LRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDEEDDDTAITEHNNFRN 1619
Frog 1620 FFQALMLLFRSATGEAWHEIMLSCLSGRPCDVGSGLK--EKECGS-EFAYFYFVSFIFLCSFLML 1681
Frog 1682 NLFVAVIMDNFEYLTRD-SSILGPHHLDEYVRVWAEYDPAAWGRMKYTDLYEMLRLISPPLGLGK 1745
Frog 1746 KCPARVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDSQLRKEMMAIWP 1810
Frog 1811 NMSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKRLQALQEEQNRTPLMFQRMEPPSPT 1875
Frog 1876 QDGPLGINALPSSQAGEMGLPEGG 1899 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cacna1a | XP_031755311.1 | Ion_trans | 1..267 | CDD:395416 | 86/293 (29%) |
Ion_trans | 382..620 | CDD:395416 | 81/335 (24%) | ||
Ion_trans | 1123..1358 | CDD:395416 | 80/239 (33%) | ||
Ion_trans | 1448..1700 | CDD:395416 | 80/259 (31%) | ||
GPHH | 1709..1762 | CDD:407139 | 17/52 (33%) | ||
Ca_chan_IQ | 1773..1846 | CDD:400901 | 14/72 (19%) | ||
PHA03307 | 2112..>2292 | CDD:223039 | |||
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 83/283 (29%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 18/132 (14%) | ||
Ion_trans | 835..1028 | CDD:278921 | 65/206 (32%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 65/505 (13%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 90/273 (33%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 12/52 (23%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 74/240 (31%) | ||
GPHH | 1880..1930 | CDD:293510 | 18/54 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |