DRSC/TRiP Functional Genomics Resources

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Protein Alignment ptpn2 and Ptp61F

DIOPT Version :9

Sequence 1:XP_004915309.2 Gene:ptpn2 / 100492067 XenbaseID:XB-GENE-953563 Length:477 Species:Xenopus tropicalis
Sequence 2:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster


Alignment Length:528 Identity:185/528 - (35%)
Similarity:278/528 - (52%) Gaps:74/528 - (14%)


- Green bases have known domain annotations that are detailed below.


 Frog     1 MEKEFREIDEENGWNSSYGDI------RNKSPVLPNKIAKNPENKNRNRYRDVNPYDHSRVKLQN 59
            :|.|::  |:...|:..|.:|      ..|........::...|:..|||||||||||||:.|:.
  Fly    19 IEAEYK--DKGPQWHRFYKEICETCDREAKEKQFSTSESERHTNRGLNRYRDVNPYDHSRIVLKR 81

 Frog    60 VENDYINASLVVVEEAQRSYILTQGPLPNTCCHFWLMVWQQKSKAIVMLNRIIEKDAVKCAQYWP 124
            ...|||||:||.:|.|:|.||||||||.:|..|||||||:|||:|::|||:::||..:||..|||
  Fly    82 GSVDYINANLVQLERAERQYILTQGPLVDTVGHFWLMVWEQKSRAVLMLNKLMEKKQIKCHLYWP 146

 Frog   125 TP--EEEALFYKETGLCVKLVSEDIKSYYTVRVLQLQDIKTGEARDIFHFHYTTWPDFGVPQSPA 187
            ..  .::||......|.|:||..:....:..|..:|.|::|.::|::..||||||||||:|.||.
  Fly   147 NEMGADKALKLPHVKLTVELVRLETYQNFVRRWFKLTDLETQQSREVMQFHYTTWPDFGIPSSPN 211

 Frog   188 SFLNFLFKVRESGSLSLQNGPAVVHCSAGIGRSGTFSLVDTCLVLMEKREDPCSVDIKQVLLNMR 252
            :||.||.:||:||.||...|||||||||||||||||.|||.||||::|..: |:|  .:||..:|
  Fly   212 AFLKFLQQVRDSGCLSRDVGPAVVHCSAGIGRSGTFCLVDCCLVLIDKYGE-CNV--SKVLCELR 273

 Frog   253 NYRMGLIQTPGQLRFSYMAVIEGSKYIMGDSSLQDHWKELSQEDQCPKIDRLSFQRQCVERCNGN 317
            :||||||||..||.|||.|:|||.|.:...:.|......:|.:.:...:|               
  Fly   274 SYRMGLIQTADQLDFSYQAIIEGIKKLHDPTFLDAEEPLISNDTETHTLD--------------- 323

 Frog   318 RLSDHGENTLESCSKPQDDGNGSPESLVRRRQQEDRKASTAQKV-HHILPSFVPAAEM------- 374
            .|.......::|.:.|....:|...||..|..|.:...|..::: ...|.:|:...:|       
  Fly   324 ELPPPLPPRVQSLNLPLAPNSGGILSLNMRAAQANGAESIGKELSKDALNNFINQHDMIHDAEVA 388

 Frog   375 -------------------QDHNKELSEDDDSLKEDSYFSLQRQPGEWYNGNRLSTED---QEIN 417
                               :|:..:..::||:.:::.|.::.....:..||:..:|..   .::|
  Fly   389 DSRPLPPLPVRAFNDSDSDEDYLLDDDDEDDTDEDEEYETINEHDADPVNGHVPATTQPHADDVN 453

 Frog   418 ENNSESSIKPQDVGDGNA------------ESLLRKRRREDRKACTTQKVQKIKQMMNEVERK-- 468
            .||.:.::...:....|.            |:.|::|:|.:.:|...|||..:|:...|.|.|  
  Fly   454 ANNEKPAVPVDEQHKANGIDPIPGQLPASPENELKRRKRNEYQASLEQKVNDMKRKQRENEDKQL 518

 Frog   469 --RKRPRL 474
              :||..|
  Fly   519 AAKKRRSL 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ptpn2XP_004915309.2 PTPc 1..274 CDD:214550 140/280 (50%)
PTPc 41..274 CDD:238006 132/234 (56%)
Ptp61FNP_476687.1 PTPc 34..295 CDD:214550 136/263 (52%)
PTPc 62..295 CDD:238006 132/235 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 272 1.000 Domainoid score I1768
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H7497
Inparanoid 1 1.050 290 1.000 Inparanoid score I2742
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D305231at33208
OrthoFinder 1 1.000 - - FOG0000704
OrthoInspector 1 1.000 - - otm47430
Panther 1 1.100 - - O PTHR46047
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2326
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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