DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myh11 and Mhc

DIOPT Version :9

Sequence 1:XP_031748845.1 Gene:myh11 / 100490639 XenbaseID:XB-GENE-6459772 Length:1980 Species:Xenopus tropicalis
Sequence 2:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster


Alignment Length:1972 Identity:793/1972 - (40%)
Similarity:1196/1972 - (60%) Gaps:51/1972 - (2%)


- Green bases have known domain annotations that are detailed below.


 Frog     8 EDE---KFLFVDKNLMNNPLAQA-DWTAKKLVWIPSEKHGFEAASIKEEKGDEVVVEMQENGKKI 68
            |||   .:|||  :|....:.|: .:.:||..|||.||.|:....||..|||.|.|.:| .|:..
  Fly     9 EDEDPTPYLFV--SLEQRRIDQSKPYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQ-GGEVR 70

 Frog    69 TISKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVVNPYKALPIY 133
            .|..:.::|:|||||.|:||||::|.||...||||||:||::.|||||||||||.:||||..|:|
  Fly    71 DIKSEKVEKVNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVY 135

 Frog   134 SEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVA 198
            :.:...||:||:|:|:||||:||:|.||..||.:..:||:|.||||||||||||||||.|.|.|.
  Fly   136 TNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVG 200

 Frog   199 SSHKGKKDTTITQGPSFAYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIV 263
            :|.|       |...:.:.|.||.|::|.||:||||||||||:|||||||||||||:|..||.:.
  Fly   201 ASKK-------TDEAAKSKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLA 258

 Frog   264 GANIETYLLEKSRAIRQARDERTFHIFYYLIQGAKPAWRE-DLLLEGFGNYTFLSYGYVPVPAAD 327
            ||:||||||||:|.|.|...||::||||.::.|:.|..:: .||.:...:|..:|.|.|.|.:.|
  Fly   259 GADIETYLLEKARVISQQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYDYHIVSQGKVTVASID 323

 Frog   328 DGDMFQETLEAMEIMGFSEDEQLSMMRVVSSVLQLGNIVFKKERNTDQASMPDDTAAQKVCHLAG 392
            |.:.|..|.:|.:|:||::.|:..:.|:.::|:.:|.:.||:....:||....:....:|..|.|
  Fly   324 DAEEFSLTDQAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFG 388

 Frog   393 INVTDFARCILTPRIKVGRDFVQKAQTKEQADFAIEALAKATYERLFLWILNRVNKALDKTKRQG 457
            .:..:..:.:|.||||||.:||.:.:..:|...:|.||.|..::|||.|::.:.|:.|| |:::.
  Fly   389 CDTAELYKNLLKPRIKVGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLD-TQQKR 452

 Frog   458 ASFLGILDIAGFEIFEVNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQ 522
            ..|:|:||||||||||.|.|||||||:|||||||.|||.||:||||||:||||:|.|||||:||.
  Fly   453 QHFIGVLDIAGFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLL 517

 Frog   523 PCIELIERPNNPPGILALLDEECWFPKATDVSFVEKVIQEQ-GNHIKFQKTKQLK---DKTIFTL 583
            .||:|||:   |.|||::|:||..||||||.:|.||:.... |....|||.|..|   ....|.:
  Fly   518 ACIDLIEK---PMGILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAI 579

 Frog   584 VHYAGKVDYDATSWLTKNMDPLNDNVTALLNQSSDKFVGDLWKDVDRIVGLDQMAKMTESSLPSA 648
            .||||.|.|:.|.||.||.|||||.|.....:|.:|.:.:::.|.....|..:.||        .
  Fly   580 AHYAGCVSYNITGWLEKNKDPLNDTVVDQFKKSQNKLLIEIFADHAGQSGGGEQAK--------G 636

 Frog   649 SKTKK-GMFRTVGQLYKEQLTKLMTTLRNTSPNFVRCIIPNHEKRSGKLDAHLVLEQLRCNGVLE 712
            .:.|| |.|.||...|||||..||||||:|.|:||||||||..|:.|.:|||||:.||.||||||
  Fly   637 GRGKKGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLE 701

 Frog   713 GIRICRQGFPNRIVFQEFRQRYEILTAGAIPK---GFMDGKQSCMLMMKALELDTNLYRIGQSKV 774
            ||||||:|||||:::.:|:.||:|:    .||   |....|::..:::|.::|..:.||:|.:||
  Fly   702 GIRICRKGFPNRMMYPDFKMRYKIM----CPKLLQGVEKDKKATEIIIKFIDLPEDQYRLGNTKV 762

 Frog   775 FFRTGVLAHLEEERDLKITDIIITFQALARGFLARKAFAKRQQQLTAMKVIQRNCAAYLKLRNWQ 839
            |||.|||..:||.||.::..|:...||.|||:|:||.|.|.|:|..|:||:|||...||:||.|.
  Fly   763 FFRAGVLGQMEEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWP 827

 Frog   840 WWRLFTKVKPLLQVTRQEEEMQLKDEELQRVNEKFFKTEIEL-KEIQMKHIQLVEEKTLLQEQLQ 903
            |::|:.||||||.|:|.|:|:...:|:.::. |:....|::: ||::..:.:|:.|||.|.:.|.
  Fly   828 WYKLWQKVKPLLNVSRIEDEIARLEEKAKKA-EELHAAEVKVRKELEALNAKLLAEKTALLDSLS 891

 Frog   904 AETELYAEAEELRIRLQAKKQELEEVLHEMEVRLEEEEDRGQQLQAEKKKTLQQMQDLEEQLEEE 968
            .|.....:.:|...:|.|:|.:||..|.:::.||.:|||...||..:|||..|::..|::.:|:.
  Fly   892 GEKGALQDYQERNAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDL 956

 Frog   969 EAARQKLQLEKVTAEAKIKKLEDDVLVMDDHHNKLTKEKKILEERVNDLTTNLAEEEEKAKNLTK 1033
            |...||.:.:|.|.:.:|:.|.|::...|:..|||.||||:..|........|...|:|..:|.|
  Fly   957 ELNVQKAEQDKATKDHQIRNLNDEIAHQDELINKLNKEKKMQGETNQKTGEELQAAEDKINHLNK 1021

 Frog  1034 LKNKHESMISELEVRLKKEEKGRQELEKVKRKLEGEANDLNEQIADLQAQIAELKMQLAKKEEEL 1098
            :|.|.|..:.|||..|::|:|.|.::||.|||:||:.....|.:|||:....||:..:.:|::||
  Fly  1022 VKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDKEL 1086

 Frog  1099 QAALARLEDETAQKNNALKKIRELESHISDLQEDLESEKSARNKAEKSKRDLGEELEALKTELED 1163
            .:..|:||||........::|:||::.|.:|:|::|:|:.||.||||.:.||..|||.|...||:
  Fly  1087 SSITAKLEDEQVVVLKHQRQIKELQARIEELEEEVEAERQARAKAEKQRADLARELEELGERLEE 1151

 Frog  1164 TLDSTATQQELRAKREQEVTVLKRALEEETRSHESQVQEMRQKHTQAVEELTEQLEQVKRVRVTL 1228
            ...:|:.|.||..|||.|::.|:|.|||....|||.:..:|:||..||.|:.||::|:.:::...
  Fly  1152 AGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKA 1216

 Frog  1229 EKSKQALEKDNSELTIEIRSLNQAKQDVEHKKKKLESQLQELQSKYTDGERVRNELTEKSHRVQV 1293
            ||.|.......::|...:..:...|...|...|:|:..|.|:|||..:..|..|:......::.:
  Fly  1217 EKEKNEYYGQLNDLRAGVDHITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASKKKLSI 1281

 Frog  1294 ELENVTVLLSEAETKSIKFSKDVAGLTAQLQDTQELLQEETRQKLNVSTKLRQVEDERNSLQEQL 1358
            |..::...|.|||::..:.||....||.||:||:.|..||:|::..:..|.|.:|.:.::|:||:
  Fly  1282 ENSDLLRQLEEAESQVSQLSKIKISLTTQLEDTKRLADEESRERATLLGKFRNLEHDLDNLREQV 1346

 Frog  1359 DEETEAKQTLERHISTLNIQLSDSKKKLQ-EFTATIESMEEGKKKLQRDIESATQQFEEKASAYD 1422
            :||.|.|..|:|.:|..|.:....:.|.: :..|..|.:||.|:|||..:..|.:..|.......
  Fly  1347 EEEAEGKADLQRQLSKANAEAQVWRSKYESDGVARSEELEEAKRKLQARLAEAEETIESLNQKCI 1411

 Frog  1423 KLEKTKNRLQQELDDLIVDLDNQRQLVSNLEKKQKKFDQMLAEEKTISSKYADERDRAEAEAREK 1487
            .|||||.||..|::||.:::|....:.:..|||||.||:::.|.|......|.|.|.::.|.|..
  Fly  1412 GLEKTKQRLSTEVEDLQLEVDRANAIANAAEKKQKAFDKIIGEWKLKVDDLAAELDASQKECRNY 1476

 Frog  1488 ETKALSLARALDEALQSKEELERTNKLLKAEMEDLVSSKDDVGKNVHDLEKAKRGLEQQVEEMKT 1552
            .|:...|..|.:|..:..|.:.|.||.|..|::||:....:.|:|:|::|||::.||.:.:|::.
  Fly  1477 STELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQA 1541

 Frog  1553 QLEELEDELQATEDAKLRLEVNMQALKAQFERDLLARDEQNEEKRRQLVKQVHEYETELEDERKQ 1617
            .|||.|..|:..|:..||.::.:..::.:.:|.:..::|:.|..|:...:.:...:..||.|.|.
  Fly  1542 ALEEAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKG 1606

 Frog  1618 RTVAAAAKKKLEVDLKDLEGQVDFASRARDEAIKQLRKLQGQMKDFQRDLDEARNAREEIFATAR 1682
            :..|...|||||.|:.:||..:|.|::|..||.|.:::.|.|:||.|..|:|.:.||::    ||
  Fly  1607 KAEALRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKDIQTALEEEQRARDD----AR 1667

 Frog  1683 E----NEKKAKSLEAELIQLQEDLAAAERARKQAELEKEELAEELAGSASGKSSLQDEKRRLEAR 1743
            |    :|::|.:|:.||.:.:..|..|:|.|:|||.|..:..|:|...::..:|:...||:||:.
  Fly  1668 EQLGISERRANALQNELEESRTLLEQADRGRRQAEQELADAHEQLNEVSAQNASISAAKRKLESE 1732

 Frog  1744 ISQLEEELEEEQGNMEGMSDRMRKAVQQAEQLNNELAAERSTSQKNESARQQLERQNKELKAKLQ 1808
            :..|..:|:|.....:...::.:||:..|.:|.:||.||:..:|..|..|:.||:|.|||:.:|.
  Fly  1733 LQTLHSDLDELLNEAKNSEEKAKKAMVDAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLD 1797

 Frog  1809 EMEGTVKSKFKSTIAALEAKISQLEEQVEQESRDKQSTVKTLRQKEKKLKEALLQVEDERKQAEQ 1873
            |.|.......|..|..||.::.:||.:::.|.|......|.||:.|:::||...|.|::||..|:
  Fly  1798 EAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRVKELSFQSEEDRKNHER 1862

 Frog  1874 YKDQSEKGNVRQKQLKRQLEEAEEESQRINASRRKLQRELDEANESSEALSRELNSLKSKLRRGN 1938
            .:|..:|...:.|..|||:|||||.:....|..||.|:||:||.|.::...:.::..::|.|.|:
  Fly  1863 MQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKAQQELEEAEERADLAEQAISKFRAKGRAGS 1927

 Frog  1939 EPSFAPPR-RSGGSRRAVDNAA 1959
            ....|.|. |:...|...|..|
  Fly  1928 VGRGASPAPRATSVRPQFDGLA 1949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myh11XP_031748845.1 Myosin_N 32..71 CDD:397036 17/38 (45%)
Motor_domain 98..777 CDD:419868 339/687 (49%)
Myosin_tail_1 854..1934 CDD:396244 363/1085 (33%)
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 16/37 (43%)
MYSc 81..777 CDD:214580 359/718 (50%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 339/687 (49%)
Myosin_tail_1 842..1897 CDD:279860 355/1059 (34%)
V_Alix_like 1557..1877 CDD:187408 102/323 (32%)
ATP-synt_B <1671..1771 CDD:304375 29/99 (29%)
TMPIT 1739..>1825 CDD:285135 28/85 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I7949
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D47111at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X58
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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