DRSC/TRiP Functional Genomics Resources

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Protein Alignment fyn and Src42A

DIOPT Version :9

Sequence 1:XP_004914619.2 Gene:fyn / 100488004 XenbaseID:XB-GENE-6053489 Length:537 Species:Xenopus tropicalis
Sequence 2:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster


Alignment Length:479 Identity:249/479 - (51%)
Similarity:319/479 - (66%) Gaps:60/479 - (12%)


- Green bases have known domain annotations that are detailed below.


 Frog    69 SSSHT-----------GTLRTRGGTGVTLFVALYDYEARTEDDLSFQKGEKFQILNSSEGDWWEA 122
            |.|||           .|.:..|.|.:|                :.:||:..::...:.|::...
  Fly  1159 SCSHTCAHLSVIDQSPATTKCFGKTSLT----------------TAKKGKSRRLSEFTRGEFLNE 1207

 Frog   123 RSLTTGGTGYIPSNYVAPVDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTYLIRESETTKGAYSL 187
            :|                        |||.|:.|.:||::||...|..|.:|||:||:....|||
  Fly  1208 KS------------------------WYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSL 1248

 Frog   188 SIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLCCRLVVPCHKGMPR 252
            |:||     ||.||||:||:||.||::|..|..|.|||:||:|||:.:.|||..|..||.:....
  Fly  1249 SVRD-----GDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYSKDSDGLCVNLCKPCVQIEKP 1308

 Frog   253 LTD-LSVKTKDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQ 316
            :|: ||.:|:|.|||.|.||:.:::||:||||:||.|.||..|.|||||||.|||.|:.||.|||
  Fly  1309 VTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMDPKDFLAEAQ 1373

 Frog   317 IMKKLKHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK--DGEGRALKLPNLVDMAAQVAAGM 378
            |||||:|.||:|||||.: ||||||:||.|..||||::|:  .|:||:||:..|:|||||:||||
  Fly  1374 IMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGM 1438

 Frog   379 AYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 443
            ||:|..|||||||.:.|:|||:|.|.|||||||||||:::||.||.||:|||||||||||.|.:|
  Fly  1439 AYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEARVGARFPIKWTAPEAANYSKF 1503

 Frog   444 TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPNSLHELMLNCWKKDPE 508
            :|||||||||||||||||.||:|||||.|.|||.|||.|||||.|.:|...|:|:||.||.|||.
  Fly  1504 SIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLECWHKDPM 1568

 Frog   509 ERPTFEYLQGFLEDYFTATEPQYQ 532
            .|||||.||..|||::|:.:..|:
  Fly  1569 RRPTFETLQWKLEDFYTSDQSDYK 1592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fynXP_004914619.2 SH3_Fyn_Yrk 85..140 CDD:212939 5/54 (9%)
SH2_Src_Fyn_isoform_a_like 145..245 CDD:198281 49/99 (49%)
PTKc_Fyn 261..534 CDD:270655 182/275 (66%)
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 49/95 (52%)
PTKc_Frk_like 1319..1587 CDD:270653 181/267 (68%)
Pkinase_Tyr 1328..1580 CDD:285015 171/251 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I8785
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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