DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myh9 and Mhc

DIOPT Version :9

Sequence 1:XP_017949131.2 Gene:myh9 / 100487997 XenbaseID:XB-GENE-1002222 Length:1960 Species:Xenopus tropicalis
Sequence 2:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster


Alignment Length:1956 Identity:784/1956 - (40%)
Similarity:1196/1956 - (61%) Gaps:55/1956 - (2%)


- Green bases have known domain annotations that are detailed below.


 Frog     3 QKDADKYLYVDRNFVNNPLAQAD----WAAKKLVWVPSEKHGFEAASVKEEVGDEAIVELAENGK 63
            |:|.|...|:   ||:....:.|    :.:||..|:|.||.|:....:|...||...|.| :.|:
  Fly     8 QEDEDPTPYL---FVSLEQRRIDQSKPYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGL-QGGE 68

 Frog    64 KAKVNKDDIQKMNPPKFSKVEDMSELACLNEASVLHNLKERYYSGLIYTYSGLFCVVINPYKYLP 128
            ...:..:.::|:|||||.|:|||:::..||...|||||::|||:.|||||||||||.|||||..|
  Fly    69 VRDIKSEKVEKVNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYP 133

 Frog   129 IYSEEIVEMYKGKKRHEMPPHIYAITDTAYRSMMQDREDQSILCTGESGAGKTENTKKVIQYLAY 193
            :|:....:||:||:|:|:||||:||:|.||..|:.:..:||:|.||||||||||||||||.|.|.
  Fly   134 VYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFAT 198

 Frog   194 VATSHK---SKKEQGELERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVNGYIVGANIE 255
            |..|.|   :.|.:|.||.|::|.||:||||||||||:|||||||||||||:|...|.:.||:||
  Fly   199 VGASKKTDEAAKSKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIE 263

 Frog   256 TYLLEKSRAIRQAKEERTFHIFYYLLSGAGEHLKSDLLL--EAYNKYRFLSNGHVTIPGQQDKDL 318
            ||||||:|.|.|...||::||||.::||:...:|...||  ..|: |..:|.|.||:....|.:.
  Fly   264 TYLLEKARVISQQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYD-YHIVSQGKVTVASIDDAEE 327

 Frog   319 FQETMEAMKIMGFTEEEQIGLLRVVSSVLQLGNIAFKKERNTDQASMPDNTAAQKLCHLMGINVN 383
            |..|.:|..|:|||::|:..:.|:.::|:.:|.:.||:....:||.........::..|.|.:..
  Fly   328 FSLTDQAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTA 392

 Frog   384 DFTRGILLPRIKVGRDFVQKAQTKEQADFAIEALAKATYERMFRWLVMRVNKALDKTKRQGASFI 448
            :..:.:|.||||||.:||.:.:..:|...:|.||.|..::|:|:|||.:.|:.|| |:::...||
  Fly   393 ELYKNLLKPRIKVGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLD-TQQKRQHFI 456

 Frog   449 GILDIAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIE 513
            |:||||||||||.|.|||||||:|||||||.|||.||:||||||:||||:|.|||||:||..||:
  Fly   457 GVLDIAGFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACID 521

 Frog   514 LIEKPAGPPGILALLDEECWFPKATDKSFVEKVVQEQ-GSHSKFQKPKQLK---DKADFCIIHYA 574
            |||||.   |||::|:||..||||||::|.||:.... |..:.|||||..|   ..|.|.|.|||
  Fly   522 LIEKPM---GILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIAHYA 583

 Frog   575 GKVDYKADEWLLKNMDPLNDNVATLLNQSSDKFVSELWRD-VDRIVGLDQVAGMADTALPGAFKT 638
            |.|.|....||.||.|||||.|.....:|.:|.:.|::.| ..:..|.:|..|       |..| 
  Fly   584 GCVSYNITGWLEKNKDPLNDTVVDQFKKSQNKLLIEIFADHAGQSGGGEQAKG-------GRGK- 640

 Frog   639 RKGMFRTVGQLYKEQLSKLMATLRNTNPNFVRCIIPNHEKKSGKLDAHLVLDQLRCNGVLEGIRI 703
            :.|.|.||...|||||:.||.|||:|.|:||||||||..|:.|.:|||||:.||.||||||||||
  Fly   641 KGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRI 705

 Frog   704 CRQGFPNRVVFQEFRQRYEILTPNSIPKGFMDGKQACVLMIKALELDSNLYRIGQSKVFFRAGVL 768
            ||:|||||:::.:|:.||:|:.|..: :|....|:|..::||.::|..:.||:|.:|||||||||
  Fly   706 CRKGFPNRMMYPDFKMRYKIMCPKLL-QGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFRAGVL 769

 Frog   769 AHLEEERDLKITDVIISFQAFCRGYLARKAFAKRQQQLTAMKVIQRNCAAYLKLRNWQWWRLFTK 833
            ..:||.||.::..::...||:.||||:||.|.|.|:|..|:||:|||...||:||.|.|::|:.|
  Fly   770 GQMEEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQK 834

 Frog   834 VKPLLQANRFDEELHAKEVELQKVKELQVSSEQKVSEMENVQMMLQQEKMQLQEQLQAEIELCAE 898
            |||||..:|.::|:...|.:.:|.:||..:..:...|:|.:...|..||..|.:.|..|.....:
  Fly   835 VKPLLNVSRIEDEIARLEEKAKKAEELHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQD 899

 Frog   899 AEEMRARLATKKQELEEILHDLESRV-EEEEERCQILQADKKKMQHNIVELEEQLEEEEAARQKL 962
            .:|..|:|..:|.:||..|.|::.|: :||:.|.|:.| .|||....|..|::.:|:.|...||.
  Fly   900 YQERNAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQ-QKKKADQEISGLKKDIEDLELNVQKA 963

 Frog   963 QLEKVTVEAKMKKLEEDVLVLEDQNSKLGKEKKLYEERIAEFTTNLAEEEEKSKSLAKLKNKHET 1027
            :.:|.|.:.:::.|.:::...::..:||.||||:..|...:....|...|:|...|.|:|.|.|.
  Fly   964 EQDKATKDHQIRNLNDEIAHQDELINKLNKEKKMQGETNQKTGEELQAAEDKINHLNKVKAKLEQ 1028

 Frog  1028 MISDLEERLRREEKQRQELEKTRRKLEGDSTDLHDQIAELQAQIAELKMQLAKKEEELQAALARV 1092
            .:.:||:.|.||:|.|.::||::||:|||.....:.:|:|:....||:..:.:|::||.:..|::
  Fly  1029 TLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDKELSSITAKL 1093

 Frog  1093 EEESAQKNIALK---KIRELESQISELQEDLETERAARNKAEKQKRDLGEELEALKTELEDTLDS 1154
            |:|..   :.||   :|:||:::|.||:|::|.||.||.|||||:.||..|||.|...||:...:
  Fly  1094 EDEQV---VVLKHQRQIKELQARIEELEEEVEAERQARAKAEKQRADLARELEELGERLEEAGGA 1155

 Frog  1155 TAAQQELRTKREQEVTQLKKTLEDEARTHEVQIQEIRQKHSQAVEELSEQLEQTKRLKGNLEKAK 1219
            |:||.||..|||.|:::|::.||:....||..:..:|:||:.||.|::||::|..:||...||.|
  Fly  1156 TSAQIELNKKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKAEKEK 1220

 Frog  1220 QSLEGERNELANEVKALLQGKGDSEHKRKKVEGQLQELQVKVTEGDRVRAELSEKANRLQVELDN 1284
            ....|:.|:|...|..:...|...|...|:::..|.|:|.|:.|.:|...:......:|.:|..:
  Fly  1221 NEYYGQLNDLRAGVDHITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASKKKLSIENSD 1285

 Frog  1285 VNSLLSQADGKSIKLGKDFSTLESQLQDTQELLQEETRQKLSFSTKLKQMEDEKNGLLEQIEEEE 1349
            :...|.:|:.:..:|.|...:|.:||:||:.|..||:|::.:...|.:.:|.:.:.|.||:|||.
  Fly  1286 LLRQLEEAESQVSQLSKIKISLTTQLEDTKRLADEESRERATLLGKFRNLEHDLDNLREQVEEEA 1350

 Frog  1350 EAKKNLSKQISTLQSQMADMKKKMD-ENVGSLETVEELKKKLQKDLESVNQRFEEKAAAYDKLEK 1413
            |.|.:|.:|:|...::....:.|.: :.|...|.:||.|:|||..|....:..|........|||
  Fly  1351 EGKADLQRQLSKANAEAQVWRSKYESDGVARSEELEEAKRKLQARLAEAEETIESLNQKCIGLEK 1415

 Frog  1414 TKTRLQQELDDIAVDLDHQRQIVSNLEKKQKKFDQLLGEEKTISAKYADERDRAEAEAREKETKA 1478
            ||.||..|::|:.:::|....|.:..|||||.||:::||.|......|.|.|.::.|.|...|:.
  Fly  1416 TKQRLSTEVEDLQLEVDRANAIANAAEKKQKAFDKIIGEWKLKVDDLAAELDASQKECRNYSTEL 1480

 Frog  1479 LALARSLEEALEAKAELERLNKQLRTEMEDLVSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEE 1543
            ..|..:.||..|....:.|.||.|..|::||:....:.|:::||:||:::.||.:.:|::..|||
  Fly  1481 FRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQAALEE 1545

 Frog  1544 LEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEDKKKQLVRQVKEMEAELEDERKQRSVA 1608
            .|..|:..|:..||.::.|..::.:.:|.:|.::|:.|:.:|...|.:..|:|.||.|.|.::.|
  Fly  1546 AEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEA 1610

 Frog  1609 VAARKKLEMDLKDLEGQIDSANKNREEAIKQLRKLQAQIKDYQRELDDTRASRDDILSQSKESEK 1673
            :..:||||.|:.:||..:|.|||...||.|.:::.|.|:||.|..|::.:.:|||...|...||:
  Fly  1611 LRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKDIQTALEEEQRARDDAREQLGISER 1675

 Frog  1674 KLKSMEAEMIHMQEELAAAERGKRQAQQERDELADEIANNSGKGALALEEKRRLESRIAQLEEEL 1738
            :..:::.|:...:..|..|:||:|||:||..:..:::...|.:.|.....||:|||.:..|..:|
  Fly  1676 RANALQNELEESRTLLEQADRGRRQAEQELADAHEQLNEVSAQNASISAAKRKLESELQTLHSDL 1740

 Frog  1739 EE---EQGNTELVNDRLKKATLQVDQLNADLNAERSNAQKNENARQQMDRQNKELKTKLQELEGT 1800
            :|   |..|:|   ::.|||.:...:|..:|.||:.:||..|..|:.:::|.|||:.:|.|.|..
  Fly  1741 DELLNEAKNSE---EKAKKAMVDAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEAN 1802

 Frog  1801 VKSKFKANITALEAKIAQLEEQLDTETKERQNASKQVRRTEKKLKDVMMQVDDERRNAEQYKDQA 1865
            .....|..|..||.::.:||.:||.|.:...:|.|.:|::|:::|::..|.:::|:|.|:.:|..
  Fly  1803 ALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLV 1867

 Frog  1866 EKNNVRMKQLKRQVEEAEEEAQRANAMRRKLQRELEDATETAEAMNREVNTLKSKLRRGGDVPFV 1930
            :|...::|..|||:|||||.|....|..||.|:|||:|.|.|:...:.::..::|.|.|.     
  Fly  1868 DKLQQKIKTYKRQIEEAEEIAALNLAKFRKAQQELEEAEERADLAEQAISKFRAKGRAGS----- 1927

 Frog  1931 TRRIGR 1936
               :||
  Fly  1928 ---VGR 1930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myh9XP_017949131.2 Myosin_N 29..68 CDD:397036 13/38 (34%)
Motor_domain 95..764 CDD:419868 345/678 (51%)
Myosin_tail_1 842..1921 CDD:396244 361/1086 (33%)
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 12/37 (32%)
MYSc 81..777 CDD:214580 364/709 (51%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 345/678 (51%)
Myosin_tail_1 842..1897 CDD:279860 352/1061 (33%)
V_Alix_like 1557..1877 CDD:187408 104/322 (32%)
ATP-synt_B <1671..1771 CDD:304375 30/102 (29%)
TMPIT 1739..>1825 CDD:285135 29/88 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D47111at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X58
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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