Sequence 1: | XP_031749152.1 | Gene: | chd1 / 100485675 | XenbaseID: | XB-GENE-960477 | Length: | 1797 | Species: | Xenopus tropicalis |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001137761.1 | Gene: | kis / 33185 | FlyBaseID: | FBgn0266557 | Length: | 5517 | Species: | Drosophila melanogaster |
Alignment Length: | 1829 | Identity: | 515/1829 - (28%) |
---|---|---|---|
Similarity: | 796/1829 - (43%) | Gaps: | 480/1829 - (26%) |
- Green bases have known domain annotations that are detailed below.
Frog 8 DSVSNSNGNSS----------------HSDDD---------------SGSGSGSSSGSSSDGSSS 41
Frog 42 QSGSS----------------DSESGSESGSQSDSDTSKEKK--------TVQSKPPRL---DGA 79
Frog 80 EFWKSNPSILAV---QRSAMLRKQQLQQQQQQQRQQASSNSGSDEDSSSSDESDEDSSSDNKKKK 141
Frog 142 --RQDEDWQMSGSGSASDS-----PSASSSSDSDTGGDRQKSSGRD----SESDYEPSHKVKNKK 195
Frog 196 SQNRSK-VKNGKTS-------------------AGQKKRD-------ADSSDDDYDDDYNKRVSR 233
Frog 234 RQATVNVSYKEDEEMKTDSDDLLEVIGEDVPQPEEDEFETIERVMDSRFGRKGATGGTTTIYAVE 298
Frog 299 AD--GDPNANFNETKEAGETQYLLKWKGWSSIHNTWETEDTLKQQNVKGMKKLDNYKKKEQEKKR 361
Frog 362 WLKAASPEDIEYYNCQQELIDD-LHKQYQIVERII---AHSNQKSAAGYPDYFCKWQGLPYSECS 422
Frog 423 WEDGALIAKKFQARIDEYISRNQSKTIPFKECKVLKQRPR---FVALKKQPSYIGGNKQLELRDY 484
Frog 485 QLDGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 549
Frog 550 QIWAPLMNAVVYLGDINSRNMIRTHEWMHPQ------TKRLKLNVLLTTYEILLKDKSFLGGVNW 608
Frog 609 AFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEE 673
Frog 674 EHGKGR-EYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYKAL 737
Frog 738 SKG-SKGSTSGFLNIMMELKKCCNHCYLIKPPEENEFYNRQEALQH----------LIRSSGKLI 791
Frog 792 LLDKLLVRLRERGNRVLIFSQMVRMLDILAEYLKSRQFPFQRLDGSIKGEVRKQALDHFNAEGSE 856
Frog 857 DFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEED 921
Frog 922 IIERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELAAILKFGAEELFKEPEGEEEE 986
Frog 987 PQEMDIDEILKRAE---TRENEGGPLTVGDELLSQFKVANFS--------TMEEDDM-------- 1032
Frog 1033 -VEPN---RDSKSWEDIIPTDQRRRME-EEEREKELQEIYLLPRMRNCAKQANFNGSE----GRR 1088
Frog 1089 SRNRRYSGSDSDSMSDRKRPKKRGRPRTIPREN----IKGFSDAEIRRFIKS--YK------KFG 1141
Frog 1142 GPLERLDAIARDAELVDKS-------ETDLRRLGELIHSGCIKALK------------------- 1180
Frog 1181 -------DSSG------QERAGGRRGKMKGPTFRISGVQVNA--KLVSSHEDELAPLHKSIPSDP 1230
Frog 1231 DERKRYVIPCHTKAA-----HFDIDWGKED----------------------------------- 1255
Frog 1256 ----------------------------------------DSNLLIGIYEYGYGSWEMIKMDPDL 1280
Frog 1281 -------------NLTQKILP----------DDPDKKPQAKQLQTRADYLIKLL---NKDLL--- 1316
Frog 1317 ------RKEAQRLSSGGNSKRRKTRAKKSKNVKPVKVEEETKSESSPPSSEN---SEEEEDQEET 1372
Frog 1373 VPLRTNNKRRAEKENEDRTELDVSVNKEPEEKK---------------------EIKENKKDPKK 1416
Frog 1417 EKKEKEEKRDTTEKEA-RDKKEIKTKEPVKEKEIKEEKVTEVKAEKEKPKKSILADTPVHITASS 1480
Frog 1481 EPVPISEEA 1489 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
chd1 | XP_031749152.1 | CD1_tandem_CHD1-2_like | 270..354 | CDD:349313 | 16/85 (19%) |
CD2_tandem_CHD1-2_like | 387..443 | CDD:349308 | 16/58 (28%) | ||
PLN03142 | 464..>1000 | CDD:215601 | 258/553 (47%) | ||
CDH1_2_SANT_HL1 | 1123..1208 | CDD:408175 | 22/131 (17%) | ||
DUF4208 | 1491..1581 | CDD:404744 | |||
U2AF_lg | 1669..>1778 | CDD:273727 | |||
kis | NP_001137761.1 | BASP1 | 1554..1786 | CDD:283191 | 52/235 (22%) |
HepA | 1676..2527 | CDD:223627 | 334/925 (36%) | ||
SDA1 | <1693..>1854 | CDD:283052 | 37/168 (22%) | ||
CHROMO | <1879..1919 | CDD:237991 | 10/44 (23%) | ||
Chromo | 1941..1996 | CDD:278797 | 16/57 (28%) | ||
DEXDc | 2048..2197 | CDD:238005 | 64/150 (43%) | ||
Helicase_C | 2350..2464 | CDD:278689 | 73/113 (65%) | ||
RR_TM4-6 | 3728..>3877 | CDD:283990 | |||
BRK | 4569..4613 | CDD:197800 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |