| Sequence 1: | XP_002938236.3 | Gene: | egflam / 100485123 | XenbaseID: | XB-GENE-968342 | Length: | 1035 | Species: | Xenopus tropicalis |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001027038.3 | Gene: | trol / 45320 | FlyBaseID: | FBgn0284408 | Length: | 4479 | Species: | Drosophila melanogaster |
| Alignment Length: | 1179 | Identity: | 278/1179 - (23%) |
|---|---|---|---|
| Similarity: | 442/1179 - (37%) | Gaps: | 271/1179 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Frog 34 GPPLDIHLEVLNCTAFSVQW----RMPRQHASTISGYTVFYTEVINGKHVKQLTQDVPVKLDMLT 94
Frog 95 LGQLDALVTFEVILVDLKPGTLHRVSV----GAYSWAGKGRPSMPRDISTLPQESCM--APGSPS 153
Frog 154 QPQVVVV------SDTEVAVSWQQNTSEGSP-----PVQYYSMEYIRPELDGIWI---------- 197
Frog 198 --PIRDQIQINSMVLKGLTPNTKYQFAVKAVNSF--GESLLSHESEII------------RTFST 246
Frog 247 EELGSGSYGEGYVTDPKSDD--DGYTTD---DSDDDIYIDELKPLPSGKAGSTKV------LVDT 300
Frog 301 KVTP---GTYTKIIPLASKSTVSTVTSTISTKAPVTTSATTTSTMASTTTAAKATKAKMAKDRGT 362
Frog 363 GFPPRLFDLTC--EETFCPA-----------------------DSFCLNDYDRGGSQCHCNLGKA 402
Frog 403 GGTCENDINV-----QFPQF--YGHSYMTFEPLKNSYQTFQITLEFRAQSDDGLLLYCGENEYGR 460
Frog 461 GDFMSVAIIRRSIQFRFNCGTGTAIITSDRKIKLGSWHVVRVYREGTNGWLQLDNSSPISAKSQG 525
Frog 526 QYSKITFRTPFYIGGAPSVYWLVKSAGTNR-GFKGCVQSLSLNGRSVDMRQWPLGKALSGADVGD 589
Frog 590 CSIGICDEAPCLNGGTC-RAKTADSYLCLCPAGFRGRHCEEAFTLAIP----------------- 636
Frog 637 -----------QFNE---------SARSFASARWPLEPHHYLSFMEFDMTFRP-DMEDGTILYSY 680
Frog 681 DT--DSKDFISLTMVNGYVVFRFDCGS--GTAVIRTEKPVTVGQWHELRFSRTARNGILQVDNQK 741
Frog 742 QVYGISEGGFTQIKCNTDLFIGGVPDYDTVKKNS--GVLKPFTGSIQKLVLNDRIISLIQGLSSG 804
Frog 805 VNLEN----------------------------------ANHPCANIPCANGGSCRPQHDSYECD 835
Frog 836 CPLGFDGKNCQKVITEAIEI---PQFIGRSYLIYDNRDILKRVSGSRSNLFMRFKTTVKDGLLMW 897
Frog 898 RGDSPIKANT--DFISLGIQQGNIVFSYNLGSGMASIVVNGSF--NDGRWHRVKAVRDGQTGKVT 958
Frog 959 VDDYGAITGKSPGLMRQLNINGALYVGGMKEIALHTNRQYLRGLIGCISHFTLSTDFHISLVADA 1023
Frog 1024 NDGKNINTC 1032 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| egflam | XP_002938236.3 | FN3 | 34..140 | CDD:238020 | 19/113 (17%) |
| FN3 | 149..243 | CDD:238020 | 24/130 (18%) | ||
| EGF_MSP1_1 | 372..407 | CDD:403985 | 11/59 (19%) | ||
| LamG | 417..567 | CDD:238058 | 50/152 (33%) | ||
| EGF_CA | 586..628 | CDD:238011 | 15/42 (36%) | ||
| LamG | 654..791 | CDD:238058 | 35/143 (24%) | ||
| EGF_CA | 814..846 | CDD:238011 | 18/31 (58%) | ||
| Laminin_G_2 | 886..1011 | CDD:396680 | 36/128 (28%) | ||
| trol | NP_001027038.3 | LDLa | 447..480 | CDD:238060 | |
| LDLa | 532..564 | CDD:238060 | |||
| LDLa | 571..606 | CDD:238060 | |||
| LDLa | 616..650 | CDD:238060 | |||
| LDLa | 704..739 | CDD:238060 | |||
| LDLa | 813..847 | CDD:238060 | |||
| LDLa | 852..887 | CDD:238060 | |||
| LDLa | 902..936 | CDD:238060 | |||
| LDLa | 956..990 | CDD:238060 | |||
| LDLa | 997..1030 | CDD:238060 | |||
| LDLa | 1033..1067 | CDD:238060 | |||
| LDLa | 1072..1105 | CDD:238060 | |||
| LDLa | 1133..1165 | CDD:238060 | |||
| LDLa | 1182..1215 | CDD:238060 | |||
| LDLa | 1221..1251 | CDD:238060 | |||
| LDLa | 1252..1286 | CDD:238060 | |||
| LDLa | 1292..1326 | CDD:238060 | |||
| IG | 1344..1421 | CDD:214652 | |||
| Ig | 1344..1405 | CDD:299845 | |||
| LDLa | 1439..1473 | CDD:238060 | |||
| LDLa | 1479..1513 | CDD:238060 | |||
| LDLa | 1522..1556 | CDD:238060 | |||
| IG_like | 1566..1649 | CDD:214653 | |||
| Ig_Perlecan_D2_like | 1574..1649 | CDD:143220 | |||
| Laminin_B | 1748..1864 | CDD:278481 | |||
| EGF_Lam | 1935..1989 | CDD:238012 | |||
| Laminin_B | 2113..2238 | CDD:278481 | |||
| EGF_Lam | <2250..2276 | CDD:238012 | |||
| EGF_Lam | 2284..2333 | CDD:238012 | |||
| Laminin_EGF | <2369..2399 | CDD:278482 | |||
| Laminin_B | 2465..2587 | CDD:278481 | |||
| I-set | 2686..2772 | CDD:254352 | |||
| Ig_2 | 2689..2771 | CDD:290606 | |||
| Ig | 2779..2865 | CDD:299845 | |||
| IG_like | 2798..2864 | CDD:214653 | |||
| Ig | 2882..2965 | CDD:299845 | |||
| IG_like | 2882..2950 | CDD:214653 | |||
| Ig | 2977..3061 | CDD:299845 | |||
| IG_like | 2984..3058 | CDD:214653 | |||
| IG_like | 3074..3152 | CDD:214653 | |||
| Ig | 3086..3153 | CDD:299845 | |||
| I-set | 3155..3243 | CDD:254352 | |||
| IGc2 | 3171..3233 | CDD:197706 | |||
| IG | 3371..3447 | CDD:214652 | 17/105 (16%) | ||
| IGc2 | 3377..3437 | CDD:197706 | 15/95 (16%) | ||
| Ig | 3456..3534 | CDD:299845 | 15/77 (19%) | ||
| IG | 3465..>3526 | CDD:214652 | 12/60 (20%) | ||
| Ig | 3603..3665 | CDD:299845 | 19/66 (29%) | ||
| IG | 3610..3683 | CDD:214652 | 21/77 (27%) | ||
| IG | 3696..3762 | CDD:214652 | 15/78 (19%) | ||
| Ig | 3704..3771 | CDD:299845 | 14/79 (18%) | ||
| LamG | 3784..3929 | CDD:238058 | 49/145 (34%) | ||
| EGF | 3952..3984 | CDD:278437 | 12/31 (39%) | ||
| LamG | 4032..4185 | CDD:238058 | 38/158 (24%) | ||
| Laminin_G_2 | 4315..4444 | CDD:280389 | 36/129 (28%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D17288at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.920 | |||||