Sequence 1: | XP_031752682.1 | Gene: | cacna1s / 100485035 | XenbaseID: | XB-GENE-5823874 | Length: | 1689 | Species: | Xenopus tropicalis |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
Alignment Length: | 2031 | Identity: | 476/2031 - (23%) |
---|---|---|---|
Similarity: | 807/2031 - (39%) | Gaps: | 615/2031 - (30%) |
- Green bases have known domain annotations that are detailed below.
Frog 29 RSLFCLGLQNPFRKSCINIVEWKPFEMIILLTIFANCIALAIYLPMPEDDTNSVNTILEKIEYIF 93
Frog 94 LFIFTIEAALKIVAYGFILHSDAYLRNCWNILDFTIVSVGLFTIVLEQINKVQGVTAPGGTGFNV 158
Frog 159 KALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGKELFSGKMHKTC 223
Frog 224 ---------------------------YYKATDVIATVEKPSPCSTTGQGRQCAINGSECRGWWP 261
Frog 262 GPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYWVNDAIGNEWPWIYFVSLILLGSFFVLNLVLG 326
Frog 327 VLSGEFTKEREKAKSRGAFQ----------------KLRE------QQAMD-------------- 355
Frog 356 ----------------------------------------------------------------- 355
Frog 356 --------------------------------------------EDLRGYLDWITHAEVMDPDME 376
Frog 377 Q--------------------------------GD--------GFSQLEE--------------- 386
Frog 387 ------GCSETE----------------------------------------------------- 392
Frog 393 ------------SLYE---------------------LEGINKFISFLKQW-----RHWHRLLRR 419
Frog 420 KCRDLVKSRFFYWFVILIILFNTITIATEHHNQPEWLTKAQDIANQVLLAMFTLEMVLKIYALGF 484
Frog 485 QSYFMSLFNRFDCFVVCTGILEILLVSSNIMSPLGISVLRCIRLLRIFKITRYWTSLNNLVASLL 549
Frog 550 NSVRSIASLLLLLFLFMIIFALLGMQMFGGKFD-----FEDTEIRRSTFDNFPQSLITVFQILTG 609
Frog 610 EDWNSVMYNGIMAYGGPTFPGMFVCI-YFIILFVCGNYILLNVFLAIAVDN-------------- 659
Frog 660 ---LAEAENLTSAQK-------AKAEERKRKKLARAHPDKSEEEKL------------------- 695
Frog 696 -------------LLAKKLEMK----------AKGEGI------------PTTAK---------- 715
Frog 716 LKIDEFESNVNEIKDPYPSADFPGDDEEEEPEIPISPRPRPLAELQLKE---------------- 764
Frog 765 ------------------------KAVPM--PDASSFFIFGPTNKFRVLCHRIVNATTFTNFILL 803
Frog 804 FILLSSISLAAEDPIEPE-SFRNQILAYFDYVFTAIFTTEIALKMTTYGAFLHKGSFCRNYFNIL 867
Frog 868 DLLVVAVSLVSFG---IQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVL 929
Frog 930 VTTLLQFMFSCIGVQLFKGKFYSCTDT--TKMTEE--------ECRGYFIVAKDGDSTQIQLRER 984
Frog 985 IWTHSDFHFDNVLSGMMSLFTISTFEGWPQLLYRAIDSHSEDMGPIYNYRIEIAVFFIIYIILIA 1049
Frog 1050 FFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVQY----------ALKARPLRRYIPKNQHQ 1104
Frog 1105 YKIWYLVTSSYFEYLMFALIMLNTISLGMQHYGQTAEFSHLSDILNVAFTGIFTVEMVLKLAAFK 1169
Frog 1170 AKGYFGDPWNVFDFLIVIGSIIDVILSEIDTPEPVVTPGSEDTSRISITFFRLFRVM---RLVKL 1231
Frog 1232 LSRGEGVRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQTFPQ 1296
Frog 1297 AVLVLFRCATGEAWQEILLACSYGKLCDPKSD--FLPGEEYTCGTSFAYFYFISFYMLCAFLI-I 1358
Frog 1359 NLFVAVIMDNFDYLTRD-WSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGK 1422
Frog 1423 FCPHRVACKRLVSMNMPLNSDGTVTFNATLFSLVRTALKIKTEGNFEQSNEELRMIIKKIWKRTS 1487
Frog 1488 MKLLDQVIPPIGDDEVTVGKFYAIFLIQEHFRKFKKRQEEYYGYRPKKNN---VEIQAGLRTVEE 1549
Frog 1550 EVEPEMQRAISGDLTA 1565 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cacna1s | XP_031752682.1 | Ion_trans | 50..340 | CDD:395416 | 91/316 (29%) |
Ion_trans | 427..668 | CDD:395416 | 78/263 (30%) | ||
Ion_trans | 794..1071 | CDD:395416 | 97/290 (33%) | ||
Ion_trans | 1113..1377 | CDD:395416 | 87/270 (32%) | ||
GPHH | 1386..1439 | CDD:407139 | 14/52 (27%) | ||
Ca_chan_IQ | 1450..1521 | CDD:400901 | 11/70 (16%) | ||
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 86/299 (29%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 4/132 (3%) | ||
Ion_trans | 835..1028 | CDD:278921 | 60/205 (29%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 40/248 (16%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 92/273 (34%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 13/55 (24%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 83/251 (33%) | ||
GPHH | 1880..1930 | CDD:293510 | 15/54 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R175 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |