DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myo5b and zip

DIOPT Version :9

Sequence 1:XP_031750785.1 Gene:myo5b / 100379760 XenbaseID:XB-GENE-988439 Length:1835 Species:Xenopus tropicalis
Sequence 2:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster


Alignment Length:2046 Identity:545/2046 - (26%)
Similarity:908/2046 - (44%) Gaps:424/2046 - (20%)


- Green bases have known domain annotations that are detailed below.


 Frog     7 YSQYTRVWIPDPEDVWRSAEIIKDYKEGDK-SLQLKLEDESVIQHRVDPNNLPHLRNPDILVGEN 70
            ::|...||:|.....:.:|.|.:::  ||: .::|....:.|:..|.|...:    ||.......
  Fly    76 WTQKRLVWVPHENQGFVAASIKREH--GDEVEVELAETGKRVMILRDDIQKM----NPPKFDKVE 134

 Frog    71 DLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYQQLPVYGEDVIYAYSGQNMGDMDP 135
            |:..|:.|:|.:||||:|.|:. |..||||.|:..|.:|||::||:|.|.::..|.|....::.|
  Fly   135 DMAELTCLNEASVLHNIKDRYY-SGLIYTYSGLFCVVVNPYKKLPIYTEKIMERYKGIKRHEVPP 198

 Frog   136 HIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFATVGGS---------------- 184
            |:||:.:.||:.|..|.::|||:.:||||||||.:.|..:::.|.|..|                
  Fly   199 HVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPHPAVLIN 263

 Frog   185 ------------------------------------ASEANVEEKVLASSPIMEAIGNAKTTRND 213
                                                ..|..:|:::|.::||:||.|||||.:||
  Fly   264 FSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNAKTVKND 328

 Frog   214 NSSRFGKYIQIGFDKRYHIIGANMRTYLLEKSRVVFQADMERNYHIFYQLCASASLPEFSELSLA 278
            |||||||:|:|.||....|.|||:.||||||||.:.||..||.:||||||.|.|:..:..:..|.
  Fly   329 NSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFILD 393

 Frog   279 EAEEFFYTNQGGDPVIDGVDDAEDFEKTRQAFTLLGVKETHQMGIFKIVASILHLGNVAIQTERE 343
            :.:.:.:.:.|..|| .||||..:|:.|.::..::|:.......||:||:::|..|::..:.||.
  Fly   394 DVKSYAFLSNGSLPV-PGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMKFRQERN 457

 Frog   344 GESCNLSKGD--KHLTHFCSLLGLEQDQMQHWLCHRKLVTTSETYVKTMSAEQAVNARNALAKHI 406
            .:...|....  :.:.|   ||||....|.......::....:...|..:.||...|..|:||..
  Fly   458 NDQATLPDNTVAQKIAH---LLGLSVTDMTRAFLTPRIKVGRDFVTKAQTKEQVEFAVEAIAKAC 519

 Frog   407 YAQLFNWIVQHVNKALHTTIKQ-HSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFK 470
            |.::|.|:|..:|::|..|.:| .||||:||:.|||.||:|||||.||||.||||||.||..:|.
  Fly   520 YERMFKWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFI 584

 Frog   471 LEQEEYMKEQIPWTLIDF-YDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHGSSQ 534
            ||||||.:|.|.|..||| .|.||.||||:...||:.||||||..||.||:.:..||...|....
  Fly   585 LEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPGGIMALLDEECWFPKATDKTFVDKLVSAHSMHP 649

 Frog   535 HFKKPRMSNVA-FIVVHFADQVEYQCDGFLEKNRDTVYEEQINILKASKYPLVADLFQNEKDTVP 598
            .|.|.....|| |.:||:|.:|:|....:|.||.|.:.|..:::|:.|:.|.|.:::::.:    
  Fly   650 KFMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAE---- 710

 Frog   599 PTPTGKSKISVRPAKPALKS------ANKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPND 657
                     .|..|:.||..      ..|...:||.|.::..|..||:||..|.|::||||.||.
  Fly   711 ---------IVGMAQQALTDTQFGARTRKGMFRTVSHLYKEQLAKLMDTLRNTNPNFVRCIIPNH 766

 Frog   658 YKESFSFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLMKKKDISLG--DKKVIC 720
            .|.:...|....:.|||..||||.|||...|:|:|..:.:|..||. |:....|..|  |.|..|
  Fly   767 EKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYE-LLTPNVIPKGFMDGKKAC 830

 Frog   721 KNVLENLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRVKY-RRMKK 784
            :.:::.|..|.:.::.|::|||||||.:|:||:.|..|.....:..|...||:|.|..| :|:::
  Fly   831 EKMIQALELDSNLYRVGQSKIFFRAGVLAHLEEERDFKISDLIVNFQAFCRGFLARRNYQKRLQQ 895

 Frog   785 --AAVTIQRYTRGHLARR----LALHLRMTKAAITFQKQFRMIRVYRGFQKTRKAAVTIQSYTRG 843
              |...|||....:|..|    ..|:.::.......:::.::::.....::.|:...|:...|:.
  Fly   896 LNAIRIIQRNCAAYLKLRNWQWWRLYTKVKPLLEVTKQEEKLVQKEDELKQVREKLDTLAKNTQE 960

 Frog   844 MFVRRAYRQLLEQHKAAIIQKHWRGWRARKLFSKFRSAAVVIQCYFRRMKARRELKQL--KIEAR 906
              ..|.|:|       |:::|   ...|.:|.::....|...:...|.|..::||:.:  ::|.|
  Fly   961 --YERKYQQ-------ALVEK---TTLAEQLQAEIELCAEAEESRSRLMARKQELEDMMQELETR 1013

 Frog   907 TAEHFKK-LSVGMENK--------------------------VVQLQRKL----------DEQN- 933
            ..|..:: |::|.|.|                          .|||..|:          |:|| 
  Fly  1014 IEEEEERVLALGGEKKKLELNIQDLEEQLEEEEAARQKLQLEKVQLDAKIKKYEEDLALTDDQNQ 1078

 Frog   934 ---KEQKDLKEQLVSATSTHAVEVEK-----------------LQKELEK-QRQAQQDENQLTSL 977
               ||:|.|:|:....:.|.|.|.||                 |::.|.| |:|.|:.:.....:
  Fly  1079 KLLKEKKLLEERANDLSQTLAEEEEKAKHLAKLKAKHEATISELEERLHKDQQQRQESDRSKRKI 1143

 Frog   978 QQELEALREELAKAYSEKKVVED----TLMNEKEQLLQRVSELEEENT----------------- 1021
            :.|:..|:|:|    :|::|..|    .|...:|:|.|.:..::||:.                 
  Fly  1144 ETEVADLKEQL----NERRVQVDEMQAQLAKREEELTQTLLRIDEESATKATAQKAQRELESQLA 1204

 Frog  1022 ---------------------NLKEEKEELSNKII-----------LRSEDEFTQSTIKENLE-- 1052
                                 :|.||.|.|.|:::           |||:.|...:|:|::||  
  Fly  1205 EIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRSKREQELATLKKSLEEE 1269

 Frog  1053 ------IKKDLEEERSRH--------QNLVKEYTRLEQRYDNLKEE----------VNIIKQQMP 1093
                  :..|:..:.|:.        :||.|..|.||:....|:.|          ||..:|:..
  Fly  1270 TVNHEGVLADMRHKHSQELNSINDQLENLRKAKTVLEKAKGTLEAENADLATELRSVNSSRQEND 1334

 Frog  1094 GHRRNPSNQ--------SSLE-SDSNYPSISTSEIGDTEDTIKEVEEAGLEKAA-------MDMS 1142
            ..|:...:|        :.:| :.|......|....:.|:...::|||.|:.:|       |:..
  Fly  1335 RRRKQAESQIAELQVKLAEIERARSELQEKCTKLQQEAENITNQLEEAELKASAAVKSASNMESQ 1399

 Frog  1143 LF-------------LKLQKRVRELELERKKLQSQLDK----KEQQENKKSQVIDTTNEV--IAD 1188
            |.             |.|..::|::|.|::.||.||::    |...|.|.::|.....|:  .|:
  Fly  1400 LTEAQQLLEEETRQKLGLSSKLRQIESEKEALQEQLEEDDEAKRNYERKLAEVTTQMQEIKKKAE 1464

 Frog  1189 RDTDIAYNNLKRQELESENKKLKNDLNEMRKTIADGAVDGSSEEARIAMLLNQLKSAHEELDVRK 1253
            .|.|:|      :|||...|:|..|:..:.:.:.:........:.....:.::|:.|..||:.::
  Fly  1465 EDADLA------KELEEGKKRLNKDIEALERQVKELIAQNDRLDKSKKKIQSELEDATIELEAQR 1523

 Frog  1254 EEVLMLRTQIVKAAQQKESERIMSSEASWPNSNKEMDEDDAIEAYHGVCETNRKTQDWGYLNEDG 1318
            .:||.|.      .:||..::|::.|       |.:.|..|.|  ....|...:.::...|:...
  Fly  1524 TKVLELE------KKQKNFDKILAEE-------KAISEQIAQE--RDTAEREAREKETKVLSVSR 1573

 Frog  1319 ELGLAY---QGLKQVARLLEAQL------QAQSRQHDEEVEILTSHIDSLKEELEKQQQVLLQAL 1374
            ||..|:   :.|:...:.|:.:|      |..:.::..|:|.....::|...||:.|.:.|...|
  Fly  1574 ELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNEELEDDL 1638

 Frog  1375 QLSPEAQVEFGLQHEITRLTNENLDLKELLEKSEKNEKK---LKKQLKTYMKKGQDSEDVVQTER 1436
            ||:.:|::...:..:..|...|    ::||.|.|..|:|   |.|||:       |.|..:..||
  Fly  1639 QLTEDAKLRLEVNMQALRSQFE----RDLLAKEEGAEEKRRGLVKQLR-------DLETELDEER 1692

 Frog  1437 KPELTRQVTVQRIE---KDFQGMLEYY---KEEEPLLVRNLIIDVK------------PEQMSSM 1483
            |.......:.:::|   |:.:..:|.:   ||:.....:.|...||            .|::.::
  Fly  1693 KQRTAAVASKKKLEGDLKEIETTMEMHNKVKEDALKHAKKLQAQVKDALRDAEEAKAAKEELQAL 1757

 Frog  1484 -------VPCLPAYILFMC--------IRHADYINDDQKVHSLLTSTINGIKKVLKKHHSEFQIT 1533
                   |..|.|.:|.:.        .|.|.....|:....:..:...|...:.:|...|.:|.
  Fly  1758 SKEAERKVKALEAEVLQLTEDLASSERARRAAETERDELAEEIANNANKGSLMIDEKRRLEARIA 1822

 Frog  1534 SFWLSNSSRLLHCLKQYSGDEGFMTSNSPKQNEHCLRNFDLTEYRQVLSDLS----IQIYQQMIK 1594
            :            |::...:|   .|||                 :||.|.|    :||.|...:
  Fly  1823 T------------LEEELEEE---QSNS-----------------EVLLDRSRKAQLQIEQLTTE 1855

 Frog  1595 IAETHMQPMIVS---AMLETESIQGLSGVKQTGYRKRTSSMADGDNSYSLEAVIRQLNTFNSIMC 1656
            :|..........   |:||.::.:..:.:.:....:||...|   ...:|||.|..|   ...:.
  Fly  1856 LANEKSNSQKNENGRALLERQNKELKAKLAEIETAQRTKVKA---TIATLEAKIANL---EEQLE 1914

 Frog  1657 DHGLDPEIIQQVFKQLFYMINAVTLNNLLLRKDVCSWSTGMQ--------LRYNISQLEEWLRGK 1713
            :.|.:..:.|:..:::...|..:|:|....|:.|......|.        |:.|:.:.||.|:.:
  Fly  1915 NEGKERLLQQKANRKMDKKIKELTMNIEDERRHVDQHKEQMDKLNSRIKLLKRNLDETEEELQKE 1979

 Frog  1714 NLHPSGAAQTMEPLIQAAQLL-----QLKKK 1739
            ........:..|.:|::.:.:     .||.|
  Fly  1980 KTQKRKYQRECEDMIESQEAMNREINSLKTK 2010

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myo5bXP_031750785.1 MYSc_Myo5 81..744 CDD:276831 268/727 (37%)
IQ 758..780 CDD:197470 7/22 (32%)
IQ 781..800 CDD:197470 6/20 (30%)
IQ 855..875 CDD:197470 3/19 (16%)
Smc 895..>1217 CDD:224117 109/496 (22%)
Smc 1123..>1458 CDD:224117 86/375 (23%)
Myo5b_CBD 1461..1832 CDD:271261 59/326 (18%)
zipNP_523860.2 Myosin_N 80..117 CDD:280832 9/38 (24%)
Myosin_head 133..854 CDD:278492 272/739 (37%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 268/727 (37%)
Myosin_tail_1 931..2011 CDD:279860 236/1166 (20%)
Prefoldin 1431..1515 CDD:298833 20/89 (22%)
FAM76 <1847..1926 CDD:292665 17/84 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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