DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pld1 and Pld

DIOPT Version :9

Sequence 1:XP_031758066.1 Gene:pld1 / 100379682 XenbaseID:XB-GENE-948465 Length:1084 Species:Xenopus tropicalis
Sequence 2:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster


Alignment Length:1255 Identity:461/1255 - (36%)
Similarity:651/1255 - (51%) Gaps:213/1255 - (16%)


- Green bases have known domain annotations that are detailed below.


 Frog    13 EHHHLLKALETESYDTALSRTGPCVASLLVCIMSLKLERSI---DSSALHKIAADMSNLIESLDT 74
            |||:                  .|:......::..:.:.::   ||..:.....|...|:|..:|
  Fly   140 EHHN------------------RCLPEFQFSLVDSEYDETLAFPDSVTILSNVGDKPVLVERKET 186

 Frog    75 SELRFEGEEVDADITSDTKVSGACFPFSAIY-HTKGFKDADLQAFLIGCPIKVRVLEVERFASSS 138
            .:   :.||.| |..:::.|.....||::|| .:..|.....:.|:.|..|.||:::.||..::.
  Fly   187 DD---DEEEFD-DEENNSVVLRHEIPFTSIYGPSVKFNSFQRKVFIPGREIHVRIVDTERSVTTH 247

 Frog   139 SSKAPVLNIYTIELTHGEFTWQVKRKYKHFQDLHRELLRYKAFIRIPIPTRSHTVRRQTVK---- 199
            ....   |:||||||||.|.|.:||:||||..||::|..::..:.||.|:|||..:|.|:|    
  Fly   248 LLNP---NLYTIELTHGPFKWTIKRRYKHFNSLHQQLSFFRTSLNIPFPSRSHKEKRTTLKATAR 309

 Frog   200 ------------------------RGDVRS----------------------------------- 205
                                    |.:.||                                   
  Fly   310 EMADESTLKDLPSHTKVKQTSTPLRAEGRSSKIAGSNANNAMAMISPNHSSILAGLTPRRIQKKR 374

 Frog   206 -------MPNLPRNAE-IVREEQSSSRRKQLEDYLSALLKMPMYRNYHATREFIDVSQLSFIHDL 262
                   :|..|...| :|..|..|.|.|||||||..||.:.:||::|.|..|::||.:||:..:
  Fly   375 KKKKKRKLPRFPNRPESLVTVENLSVRIKQLEDYLYNLLNISLYRSHHETLNFVEVSNVSFVPGM 439

 Frog   263 GPKGIEGTIMKRSGGHRIPG-----------LNCCGQGS------VCYRWSKRWLVVKDSFLLYM 310
            |.||.||.|:||:|..| ||           .|||.:.:      ||..|..||..||::...|:
  Fly   440 GIKGKEGVILKRTGSTR-PGQAGCNFFGCFQKNCCVRCNYFCSDVVCGTWRNRWFFVKETCFGYI 503

 Frog   311 KLDTGAISFVLLVDKEFSIKIGKKETETKYGLRIDNLSRTLILKCNSYRHARWWGQAIEEFVRKN 375
            :...|:|..|:|.|:.|.:..|..:|..:.||::...:|.::|||.:.|..:.|.|.::......
  Fly   504 RPTDGSIRAVILFDQGFDVSTGIYQTGMRKGLQVLTNNRHIVLKCWTRRKCKEWMQYLKNTANSY 568

 Frog   376 GKNFLTDHRFGSYAAIQNNTLSKWYVNAKFYFSDVADAMESAKEEIFITDWWLSPEIFLKRPVVE 440
            .::|...:...|:|.::.||.:.|||:...|.|.|||.:|:|.|||:|.||||||||::|||.::
  Fly   569 ARDFTLPNPHMSFAPMRANTHATWYVDGAQYMSAVADGLEAALEEIYIADWWLSPEIYMKRPALD 633

 Frog   441 GNRWRLDCILKRKAQQGVKIFVMLYKEVELALGINSEYSKRTLLRIHPNIKVMRHPDHMSSSVYL 505
            |:.||||.||.|||:|||::||:||||||:||||||.|||.||.: |.||||||||||....:.|
  Fly   634 GDYWRLDKILLRKAEQGVRVFVLLYKEVEMALGINSYYSKSTLAK-HENIKVMRHPDHARGGILL 697

 Frog   506 WAHHEKIVVIDQSVAFVGGIDLAYGRWDDDEHRLTDVGSVKRIVTTQST--TAINKISSDSTSSL 568
            ||||||||||||:.||:|||||.||||||..|||||:||:.....:.||  |.....:.|.|.|.
  Fly   698 WAHHEKIVVIDQTYAFMGGIDLCYGRWDDHHHRLTDLGSISTSSFSGSTRRTPSLYFTKDDTDSA 762

 Frog   569 NGDNRPEKKKSFEVPAKK----------------------DEDAVDSSRIRGLG----------- 600
            .|..:..:...::..||:                      |...:.|:.:...|           
  Fly   763 FGSRKSSRNAHYDTSAKERPPSPPPDEPNTSIELKTLKPGDRLLIPSTLVSSPGETPAESGIALE 827

 Frog   601 -----------------------KSRKFAKFSLYKQLHKHNLQHADSVSSIDSE---SHRGSIRS 639
                                   |..:..|..:::.......:.:..|.:|:||   .|..::..
  Fly   828 GMKLNTPEMERKNVLDRLKNNAMKGARMGKDFMHRLTATETEEKSAEVYTIESEEATDHEVNLNM 892

 Frog   640 LQTG------------VGELLGETRFWHGKDYCNFVFKDWVQLDKPFADFIDRYQTPRMPWHDIA 692
            ...|            :.|..|:.::|.||||.||:.|||:.|:.||.|.|||..||||||||:.
  Fly   893 ASGGQEVAITTSSTQILSEFCGQAKYWFGKDYSNFILKDWMNLNSPFVDIIDRTTTPRMPWHDVG 957

 Frog   693 SVVHGKAARDVARHFIQRWNFAKIMKPKYRSLSYPFLLPKSNKTAKELP-YQVPGSVHAQVQVLR 756
            ..|.|.:|||||||||||||..|:.|.: .:..:|:|:|||....:..| .|.........|:||
  Fly   958 LCVVGTSARDVARHFIQRWNAMKLEKLR-DNTRFPYLMPKSYHQVRLNPNIQQNRQQRVTCQLLR 1021

 Frog   757 SAADWSAGI---KYHEESIHNAYVHVIENSKHYIYIENQFFISC--------ADNKLVFNKIGDT 810
            |.:.||.|.   ...|:|||:||:..|..::||:||||||||:.        |.|. |.|:||:|
  Fly  1022 SVSAWSCGFIEADLVEQSIHDAYIQTITKAQHYVYIENQFFITMQLGMGVPGAYNN-VRNQIGET 1085

 Frog   811 IAQRILKAHRENKRYRVYVITPLLPGFEGDISTGGGSALQAVMHFNYRTICRGDNSIIGQL-KAE 874
            :.:||::||:|.|.:|||||.|||||||||:....|.|::|:.|:||.:|.||..||:.:| :|.
  Fly  1086 LFKRIVRAHKERKPFRVYVIMPLLPGFEGDVGGSTGIAVRAITHWNYASISRGRTSILTRLQEAG 1150

 Frog   875 IGNQWINYISFCGLRTHAELEGNLVTELIYVHSKLLIADDNTVIIGSANINDRSMMGKRDSEMAV 939
            |.|. .|||||..||.|:.|....:|||||||||||||||..||.||||||||||:||||||:|.
  Fly  1151 IANP-ENYISFHSLRNHSFLNNTPITELIYVHSKLLIADDRVVICGSANINDRSMIGKRDSEIAA 1214

 Frog   940 VFQDTETVPSVMDGETYEAGKFALSLRMHCFRLLLGCFND-----PSVNIQDPVSDKFFKEVWVA 999
            :..|.|.....|:|:.|.:|.||..||.:.|:..||....     ..::|.|||.:||:...|..
  Fly  1215 ILMDEEFEDGRMNGKKYPSGVFAGRLRKYLFKEHLGLLESEGSSRSDLDINDPVCEKFWHGTWRR 1279

 Frog  1000 TAARNTTIFDKVFRCLPSDEVHNFFHLPEYLAKPGLATQDRVKAQEELQRIKGFVVQFPFFFLAA 1064
            .:.:||.|:|:||:|:|:|.|..|..|.:|..:|.||......|......|:|::|..|..||..
  Fly  1280 ISMQNTEIYDEVFKCIPTDFVKTFASLRKYQEEPPLAKTAPDLAANRANDIQGYLVDLPLEFLNK 1344

 Frog  1065 ENLLPSVGTKEAMVPMETWT 1084
            |.|.|...:||.::|...||
  Fly  1345 EVLTPPGTSKEGLIPTSVWT 1364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pld1XP_031758066.1 PLN02866 125..1069 CDD:215467 432/1122 (39%)
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 59/203 (29%)
PH_PLD 419..564 CDD:269956 48/145 (33%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 98/144 (68%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 103/189 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 179 1.000 Domainoid score I3472
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 685 1.000 Inparanoid score I694
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330134at33208
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm48541
Panther 1 1.100 - - LDO PTHR18896
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1041
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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