DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pld2 and Pld

DIOPT Version :9

Sequence 1:XP_031753569.1 Gene:pld2 / 100216200 XenbaseID:XB-GENE-5998608 Length:939 Species:Xenopus tropicalis
Sequence 2:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster


Alignment Length:1213 Identity:434/1213 - (35%)
Similarity:586/1213 - (48%) Gaps:299/1213 - (24%)


- Green bases have known domain annotations that are detailed below.


 Frog    13 PDSL-------DPGALV----NDIDEVDFSGDEEEDGFPRS--PFLAIY--DMKPLKHERSVFMK 62
            |||:       |...||    .|.||.:|..:|......|.  ||.:||  .:|....:|.||:.
  Fly   165 PDSVTILSNVGDKPVLVERKETDDDEEEFDDEENNSVVLRHEIPFTSIYGPSVKFNSFQRKVFIP 229

 Frog    63 GVPVTARVSDTERYTRGTKVRHSTLYTIILTHGPFTWTIKKKFKHFQELHRDLLRHKLFISFLPF 127
            |..:..|:.||||... |.:.:..||||.||||||.||||:::|||..||:.|...:..:: :||
  Fly   230 GREIHVRIVDTERSVT-THLLNPNLYTIELTHGPFKWTIKRRYKHFNSLHQQLSFFRTSLN-IPF 292

 Frog   128 NPLSRFH-VTRSRVETTSSEM------PSLP------------HASGEAS--------------- 158
            .  ||.| ..|:.::.|:.||      ..||            .|.|.:|               
  Fly   293 P--SRSHKEKRTTLKATAREMADESTLKDLPSHTKVKQTSTPLRAEGRSSKIAGSNANNAMAMIS 355

 Frog   159 ---------------QRMASKK-------------------------AYLNNYLNVLLEKSFYRN 183
                           |:...||                         ..|.:||..||..|.||:
  Fly   356 PNHSSILAGLTPRRIQKKRKKKKKRKLPRFPNRPESLVTVENLSVRIKQLEDYLYNLLNISLYRS 420

 Frog   184 YHAMREFLDVSQLSFIADLGPKGLEGFIQKRSGGHR--IQGLNCFGHHQ--------------IC 232
            :|....|::||.:||:..:|.||.||.|.||:|..|  ..|.|.||..|              :|
  Fly   421 HHETLNFVEVSNVSFVPGMGIKGKEGVILKRTGSTRPGQAGCNFFGCFQKNCCVRCNYFCSDVVC 485

 Frog   233 YRWSKRWLVVKDSFLLYLKPDTGEISFVLLFDPGFSIDIGKRTTETKYGVKIQNFTRALTLKCNG 297
            ..|..||..||::...|::|..|.|..|:|||.||.:..|...|..:.|:::....|.:.|||..
  Fly   486 GTWRNRWFFVKETCFGYIRPTDGSIRAVILFDQGFDVSTGIYQTGMRKGLQVLTNNRHIVLKCWT 550

 Frog   298 YRQASWWGQQIRRLAEDHGKDFLSLHRFDCFAPVREKTQVKWFVNGSTYFAAVADALMQAQEEIF 362
            .|:...|.|.::..|..:.:||...:....|||:|..|...|:|:|:.|.:||||.|..|.|||:
  Fly   551 RRKCKEWMQYLKNTANSYARDFTLPNPHMSFAPMRANTHATWYVDGAQYMSAVADGLEAALEEIY 615

 Frog   363 ITDWWLSPEVHLKRPAHTDD-WRLDIILKRKAEAGVRVCVLLFKEVQMALGINSDYSKRVLMLLH 426
            |.|||||||:::||||...| ||||.||.||||.||||.|||:|||:|||||||.|||..| ..|
  Fly   616 IADWWLSPEIYMKRPALDGDYWRLDKILLRKAEQGVRVFVLLYKEVEMALGINSYYSKSTL-AKH 679

 Frog   427 PNIKVMRHPDHVSSVVFLWAHHEKMVAIDQSVVFLGGLDLAYGRWDDHEYRLTDVGPME------ 485
            .||||||||||....:.|||||||:|.|||:..|:||:||.|||||||.:||||:|.:.      
  Fly   680 ENIKVMRHPDHARGGILLWAHHEKIVVIDQTYAFMGGIDLCYGRWDDHHHRLTDLGSISTSSFSG 744

 Frog   486 --------------------QQQQSRSMEGDITMNEVEQSP------------------------ 506
                                .::.||:...|.:..|...||                        
  Fly   745 STRRTPSLYFTKDDTDSAFGSRKSSRNAHYDTSAKERPPSPPPDEPNTSIELKTLKPGDRLLIPS 809

 Frog   507 ------------------------------NV--------------------------------- 508
                                          ||                                 
  Fly   810 TLVSSPGETPAESGIALEGMKLNTPEMERKNVLDRLKNNAMKGARMGKDFMHRLTATETEEKSAE 874

 Frog   509 -----------------------------------------TQYWLGKDYSNSIYKDWVQLDKPF 532
                                                     .:||.||||||.|.|||:.|:.||
  Fly   875 VYTIESEEATDHEVNLNMASGGQEVAITTSSTQILSEFCGQAKYWFGKDYSNFILKDWMNLNSPF 939

 Frog   533 EDFIDRMKNPRMPWRDVGAVVHGKAARDVSRHFIQRWNYTKTMKYKAAT-YPYLLPKSLSTA--- 593
            .|.|||...|||||.|||..|.|.:||||:||||||||..|..|.:..| :|||:|||....   
  Fly   940 VDIIDRTTTPRMPWHDVGLCVVGTSARDVARHFIQRWNAMKLEKLRDNTRFPYLMPKSYHQVRLN 1004

 Frog   594 -----DRQHYTVPGCHTAAVQVLRSVDWWSAG-----CTEYSILNAYLDCIENSQHYVYLENQFF 648
                 :||       .....|:||||..||.|     ..|.||.:||:..|..:|||||:|||||
  Fly  1005 PNIQQNRQ-------QRVTCQLLRSVSAWSCGFIEADLVEQSIHDAYIQTITKAQHYVYIENQFF 1062

 Frog   649 ITCADG-------RTIFNNIGDAIVKRIQQAHSAKANFRVFIVIPLLPGFQGNIEVGGGYSIQAI 706
            ||...|       ..:.|.||:.:.|||.:||..:..|||::::||||||:|::....|.:::||
  Fly  1063 ITMQLGMGVPGAYNNVRNQIGETLFKRIVRAHKERKPFRVYVIMPLLPGFEGDVGGSTGIAVRAI 1127

 Frog   707 LHYTYSTICRGDNSIISRLKETMGEDWTKYLSVCGLRTHGDMPDGSLVTELVYIHSKMLIVDDRR 771
            .|:.|::|.||..||::||:|....:...|:|...||.|..: :.:.:|||:|:|||:||.|||.
  Fly  1128 THWNYASISRGRTSILTRLQEAGIANPENYISFHSLRNHSFL-NNTPITELIYVHSKLLIADDRV 1191

 Frog   772 VIIGSANINDRSMLGSRDSELAVLVEDMEFVSSVMDGEPYQAGKFALSLRMDCFNTILGARAS-- 834
            ||.||||||||||:|.||||:|.::.|.||....|:|:.|.:|.||..||...|...||...|  
  Fly  1192 VICGSANINDRSMIGKRDSEIAAILMDEEFEDGRMNGKKYPSGVFAGRLRKYLFKEHLGLLESEG 1256

 Frog   835 ---PHIDVSDPVTDHFFNEVWKQTAFNNTYVYDQMFRCLPADAVTSNRTLQEYTAVKNLAALNPG 896
               ..:|::|||.:.|::..|::.:..||.:||::|:|:|.|.|.:..:|::|.....||...|.
  Fly  1257 SSRSDLDINDPVCEKFWHGTWRRISMQNTEIYDEVFKCIPTDFVKTFASLRKYQEEPPLAKTAPD 1321

 Frog   897 LAREQLTGIRGHLVECPLQFLSGENLLPPLSSKEGLISSQVWT 939
            ||..:...|:|:||:.||:||:.|.|.||.:||||||.:.|||
  Fly  1322 LAANRANDIQGYLVDLPLEFLNKEVLTPPGTSKEGLIPTSVWT 1364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pld2XP_031753569.1 PLN02866 88..938 CDD:215467 403/1120 (36%)
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 54/204 (26%)
PH_PLD 419..564 CDD:269956 48/144 (33%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 94/144 (65%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 86/188 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 214 1.000 Domainoid score I2693
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 685 1.000 Inparanoid score I694
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330134at33208
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm48541
Panther 1 1.100 - - O PTHR18896
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1041
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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