DRSC/TRiP Functional Genomics Resources

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Protein Alignment rnf150 and RNF150

DIOPT Version :9

Sequence 1:NP_001135553.1 Gene:rnf150 / 100216098 XenbaseID:XB-GENE-5993052 Length:427 Species:Xenopus tropicalis
Sequence 2:XP_005263207.1 Gene:RNF150 / 57484 HGNCID:23138 Length:460 Species:Homo sapiens


Alignment Length:461 Identity:359/461 - (77%)
Similarity:389/461 - (84%) Gaps:35/461 - (7%)


- Green bases have known domain annotations that are detailed below.


 Frog     1 MAMSLIQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYTDPL-----------SH 54
            |||||||||.||||||||||||||||||||||||||||||||||||||.:|.           ..
Human     1 MAMSLIQACCSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYAEPAPDPGAGAAGGGGA 65

 Frog    55 QWRTEKSECGRYGEHSLKQDAWGLAVMPSSPQDRLACDPATKFSVPANASRWVALIPKGNCTYRD 119
            :..|||:|||||||||.||||.|..||.||..|||||||.|||:.|.....|:||||||||||||
Human    66 ELHTEKTECGRYGEHSPKQDARGEVVMASSAHDRLACDPNTKFAAPTRGKNWIALIPKGNCTYRD 130

 Frog   120 KIKHAALQNASAVLIYNVGSSNANETITMPH----------------------PGIEDIVAIMIP 162
            ||::|.|||||||:|:||| ||.||||||||                      .|:|||||||||
Human   131 KIRNAFLQNASAVVIFNVG-SNTNETITMPHAGLMSSHAQPLKLISPCPYSLSSGVEDIVAIMIP 194

 Frog   163 EPKGREIATLLERNINVTIYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRY 227
            ||||:||.:||||||.||:||||||||||||||||||||||||||||||||||||||||||||||
Human   195 EPKGKEIVSLLERNITVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRY 259

 Frog   228 ANARDRNQRRLGDAAKKAISKLQVRTIKKGDKETEPEFDNCAVCIEGYKPNDVVRILPCRHLFHK 292
            |||||||||||||||||||||||:|||||||||||.:||||||||||||||||||||||||||||
Human   260 ANARDRNQRRLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHK 324

 Frog   293 SCVDPWLLDHRTCPMCKMNILKALGIPPNADCLDDIPPDFEGSV-GPPTNQITGASDVTVNESSV 356
            ||||||||||||||||||||||||||||||||:||:|.|||||: ||||||||||||.|||||||
Human   325 SCVDPWLLDHRTCPMCKMNILKALGIPPNADCMDDLPTDFEGSLGGPPTNQITGASDTTVNESSV 389

 Frog   357 GIDPSVRTVGVLQVIQDAESLPQVGEVSYTASSEQEPAVSSDSDISLIMAVDVGLSDVDLSTDQD 421
            .:||:|||||.|||:||.:.:||.|:|.:|.:||||||||||||||||||::||||||:||||||
Human   390 TLDPAVRTVGALQVVQDTDPIPQEGDVIFTTNSEQEPAVSSDSDISLIMAMEVGLSDVELSTDQD 454

 Frog   422 CDEAKS 427
            |:|.||
Human   455 CEEVKS 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnf150NP_001135553.1 PA_GRAIL_like 45..183 CDD:239037 98/170 (58%)
UPF0233 <197..>222 CDD:299753 24/24 (100%)
zf-RING_2 266..309 CDD:290367 42/42 (100%)
RNF150XP_005263207.1 PA_GRAIL_like 45..215 CDD:239037 98/170 (58%)
UPF0233 <229..>254 CDD:299753 24/24 (100%)
zf-RING_2 298..341 CDD:290367 42/42 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 191 1.000 Domainoid score I16291
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H33783
Inparanoid 1 1.050 725 1.000 Inparanoid score I5115
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG50669
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0000832
OrthoInspector 1 1.000 - - oto154702
Panther 1 1.100 - - LDO PTHR22765
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3602
SonicParanoid 1 1.000 - - X295
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1313.110

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