DRSC/TRiP Functional Genomics Resources

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Protein Alignment rnf150 and gol

DIOPT Version :10

Sequence 1:NP_001135553.1 Gene:rnf150 / 100216098 XenbaseID:XB-GENE-5993052 Length:427 Species:Xenopus tropicalis
Sequence 2:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster


Alignment Length:332 Identity:130/332 - (39%)
Similarity:190/332 - (57%) Gaps:25/332 - (7%)


- Green bases have known domain annotations that are detailed below.


 Frog    42 AFVNITYTDPLSHQWRTE-KSECGRYGEHSLKQDAWGLAVMPSSP--QDRLACDPATKFS----V 99
            ||:|.:|.:..:.....| ..|..||||..:......|..:.::.  .|..||.|..:.:    :
  Fly    70 AFLNWSYVEHGNMLCNMEFAQEQARYGEGKVLNVTGRLIHITATDNFSDDYACTPYIRGTLGAPI 134

 Frog   100 PANASRWVALIPKGNCTYRDKIKHAALQNASAVLIYNVGSSNANETITMPHPG-IEDIVAIMIPE 163
            |.....|:||:.:|.||:.:|:||...|||:.|:|||  .....:...|...| ..:|.|::..:
  Fly   135 PDKGETWIALVRRGRCTFEEKVKHVYQQNAAGVIIYN--DKQVMQLEKMQIKGKTRNIAAVITYQ 197

 Frog   164 PKGREIATLLERNINVTIYITIGTRNLQ--KYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFR 226
            ..|::::..|::..||||.|..|.|.::  ..::||||:||||||||||||||.||:||||||||
  Fly   198 NIGQDLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFR 262

 Frog   227 YANARDRNQRRLGDAAKKAISKLQVRTIKKGDKETEPEFDNCAVCIEGYKPNDVVRILPCRHLFH 291
            |..|:|:..|.|....||||.|:..:|.|..| |.:.:.|.||:|||.|||.|.:|||||:|.||
  Fly   263 YMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSD-EKDLDSDCCAICIEAYKPTDTIRILPCKHEFH 326

 Frog   292 KSCVDPWLLDHRTCPMCKMNILKALG--IPPNADCLDDIPPDFEGSVGPPTNQITGASDVTVNES 354
            |:|:||||::||||||||:::||..|  ...:.:.:.:..||      ||    .|.:.|...:.
  Fly   327 KNCIDPWLIEHRTCPMCKLDVLKFYGYVFLGSEESILEYQPD------PP----QGLALVEARDE 381

 Frog   355 SVGIDPS 361
            |..::.|
  Fly   382 SADLNRS 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnf150NP_001135553.1 PA_GRAIL_like 45..183 CDD:239037 40/145 (28%)
RING-H2_RNF150 260..314 CDD:438456 33/53 (62%)
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 40/145 (28%)
HRD1 <237..>347 CDD:227568 70/110 (64%)
RING-H2_RNF130-like 302..347 CDD:438330 31/44 (70%)

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