Sequence 1: | NP_001135553.1 | Gene: | rnf150 / 100216098 | XenbaseID: | XB-GENE-5993052 | Length: | 427 | Species: | Xenopus tropicalis |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001178022.1 | Gene: | Rnf150 / 364983 | RGDID: | 1304572 | Length: | 437 | Species: | Rattus norvegicus |
Alignment Length: | 438 | Identity: | 359/438 - (81%) |
---|---|---|---|
Similarity: | 391/438 - (89%) | Gaps: | 12/438 - (2%) |
- Green bases have known domain annotations that are detailed below.
Frog 1 MAMSLIQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYTDPLS----------HQ 55
Frog 56 WRTEKSECGRYGEHSLKQDAWGLAVMPSSPQDRLACDPATKFSVPANASRWVALIPKGNCTYRDK 120
Frog 121 IKHAALQNASAVLIYNVGSSNANETITMPHPGIEDIVAIMIPEPKGREIATLLERNINVTIYITI 185
Frog 186 GTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQ 250
Frog 251 VRTIKKGDKETEPEFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKA 315
Frog 316 LGIPPNADCLDDIPPDFEGSV-GPPTNQITGASDVTVNESSVGIDPSVRTVGVLQVIQDAESLPQ 379
Frog 380 VGEVSYTASSEQEPAVSSDSDISLIMAVDVGLSDVDLSTDQDCDEAKS 427 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rnf150 | NP_001135553.1 | PA_GRAIL_like | 45..183 | CDD:239037 | 100/147 (68%) |
UPF0233 | <197..>222 | CDD:299753 | 24/24 (100%) | ||
zf-RING_2 | 266..309 | CDD:290367 | 41/42 (98%) | ||
Rnf150 | NP_001178022.1 | PA_GRAIL_like | 45..192 | CDD:239037 | 100/147 (68%) |
UPF0233 | <206..>231 | CDD:299753 | 24/24 (100%) | ||
zf-RING_2 | 275..318 | CDD:290367 | 41/42 (98%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 187 | 1.000 | Domainoid score | I15692 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H33783 | |
Inparanoid | 1 | 1.050 | 724 | 1.000 | Inparanoid score | I4745 |
OMA | 1 | 1.010 | - | - | QHG50669 | |
OrthoDB | 1 | 1.010 | - | - | D1487241at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000832 | |
OrthoInspector | 1 | 1.000 | - | - | oto204748 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR22765 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X295 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 12.080 |