DRSC/TRiP Functional Genomics Resources

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Protein Alignment rnf150 and SPAC57A7.09

DIOPT Version :9

Sequence 1:NP_001135553.1 Gene:rnf150 / 100216098 XenbaseID:XB-GENE-5993052 Length:427 Species:Xenopus tropicalis
Sequence 2:NP_593372.1 Gene:SPAC57A7.09 / 2542187 PomBaseID:SPAC57A7.09 Length:372 Species:Schizosaccharomyces pombe


Alignment Length:256 Identity:53/256 - (20%)
Similarity:95/256 - (37%) Gaps:77/256 - (30%)


- Green bases have known domain annotations that are detailed below.


 Frog   109 LIPKGNCTYRDKIKHAALQNASAVLIYNVGSSNANETITMPHPGIEDIVAIMIPEPKGREIATLL 173
            |:.:|.|||.||...|.......|::.:..|.::.....|..|...|...:.||           
pombe   146 LVQRGKCTYFDKALEAQRLGFKGVIVGDNRSPSSFRLHYMVAPDKVDESKVHIP----------- 199

 Frog   174 ERNINVTIYITIGTRN-------------LQKYVSRTSV------VFVSISFIVLMIISLAWLVF 219
                  :::::..:.|             |:.|.....:      ..:..|..::|:|::..|. 
pombe   200 ------SLFVSTSSYNLLWSDLLHSYRQPLKLYAKPEELGDMFWPFLLCFSPSIIMLITVQALA- 257

 Frog   220 YYIQRF-RYANARDRNQRRLGDAAKKAISKLQVRTIKKGDKETEPEFDN---------------- 267
              |::| |....:.:.:|.:.|...:.||       ::|....|.|.:|                
pombe   258 --IRKFIRTYRTKSKTRRFIEDLPSRTIS-------REGFYSEEEEIENSTQNGELVPLMDESTR 313

 Frog   268 -------CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHR-TCPMCKMNILKALGIPP 320
                   |.:|:|.:...|.|..|||:|.||:.|:..|::|:| .||.|...      :||
pombe   314 RATFGVECVICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTCNTE------VPP 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnf150NP_001135553.1 PA_GRAIL_like 45..183 CDD:239037 15/73 (21%)
UPF0233 <197..>222 CDD:299753 4/30 (13%)
zf-RING_2 266..309 CDD:290367 18/66 (27%)
SPAC57A7.09NP_593372.1 COG5540 1..369 CDD:227827 53/256 (21%)
Peptidases_S8_S53 <144..211 CDD:299169 16/81 (20%)
zf-RING_2 320..362 CDD:290367 17/41 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm70948
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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