Sequence 1: | NP_001135553.1 | Gene: | rnf150 / 100216098 | XenbaseID: | XB-GENE-5993052 | Length: | 427 | Species: | Xenopus tropicalis |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_497129.1 | Gene: | H10E21.5 / 175169 | WormBaseID: | WBGene00019185 | Length: | 473 | Species: | Caenorhabditis elegans |
Alignment Length: | 392 | Identity: | 126/392 - (32%) |
---|---|---|---|
Similarity: | 187/392 - (47%) | Gaps: | 109/392 - (27%) |
- Green bases have known domain annotations that are detailed below.
Frog 24 VHLLCLD-----------FTVAEKEEWYTAFVNITYTDPLSHQWRTEKSE----CGRYGEHSLKQ 73
Frog 74 DAWGLAVMPSSPQDRLACDPATKFSVPANASRWVAL-IPKGNCTYRDKIKHAALQNASAVLIYNV 137
Frog 138 GSSNANETITMPHPGIEDIVAIMIPEPKGREIATLLERNINVTIYITIGTRNLQKYVSRTSVVFV 202
Frog 203 SISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQVRTIKKGDKETEPEFDN 267
Frog 268 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPPNADCLDDIPPDF 332
Frog 333 EGSVGPPTNQITGASDVTVNESSVGIDPSVRTVGVLQVIQDAESLPQVGEVSYTASSEQEPAVSS 397
Frog 398 DS 399 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rnf150 | NP_001135553.1 | PA_GRAIL_like | 45..183 | CDD:239037 | 25/142 (18%) |
UPF0233 | <197..>222 | CDD:299753 | 21/24 (88%) | ||
zf-RING_2 | 266..309 | CDD:290367 | 27/42 (64%) | ||
H10E21.5 | NP_497129.1 | HRD1 | <150..325 | CDD:227568 | 92/223 (41%) |
RING-H2_GRAIL | 226..273 | CDD:319582 | 30/46 (65%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 84 | 1.000 | Domainoid score | I5695 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000832 | |
OrthoInspector | 1 | 1.000 | - | - | otm21426 | |
Panther | 1 | 1.100 | - | - | O | PTHR22765 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3602 |
SonicParanoid | 1 | 1.000 | - | - | X295 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.040 |