DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kirrel1b and Dscam2

DIOPT Version :9

Sequence 1:XP_017212964.1 Gene:kirrel1b / 100170816 ZFINID:ZDB-GENE-070912-173 Length:801 Species:Danio rerio
Sequence 2:NP_001261500.1 Gene:Dscam2 / 38788 FlyBaseID:FBgn0265296 Length:2101 Species:Drosophila melanogaster


Alignment Length:848 Identity:189/848 - (22%)
Similarity:296/848 - (34%) Gaps:248/848 - (29%)


- Green bases have known domain annotations that are detailed below.


Zfish    33 DQSVVIGERVVLSC-VVFNYTGIVQWTKDGLALGIGEDLRAWPRYRVLRIMDVGQY--------- 87
            :|::..|..|.|.| ...|.|..:.||.||..|....           |.| :|||         
  Fly   431 EQTLQPGPAVSLKCSAAGNPTPQISWTLDGFPLPSNG-----------RFM-IGQYITVHGDVIS 483

Zfish    88 NLEITSADLTDDSLYECQATEAALR-SRRAKLTVLIPPDG-PVIEGSPEILLTAGTSFNLTCVSR 150
            ::.|:...:.|...|.|.|...|.| ...|:|.:.    | |.|...|::...:|.:.||.|...
  Fly   484 HVNISHVMVEDGGEYACIAENRAGRVQHAARLNIY----GLPYIRLIPKVTAVSGETLNLKCPVA 544

Zfish   151 GAKPMSTIEWYKDGIIVEGAHTSTEVLSD-RKRVTTKSFLEIQPM--DTDTGRNFTCVASNLAAP 212
            | .|:..|.|.:.|         .|:..| |:||.....|.|.|:  ::|:| .:||.|.|....
  Fly   545 G-YPIEEIHWERGG---------RELPDDIRQRVQPDGSLTISPVQKNSDSG-VYTCWARNKQGH 598

Zfish   213 LGKRS-TVTLNIHHPPTVILSIEPRSVLE---GERVKFTCQATANPPIMGYRWAKGGVILDGARE 273
            ..:|| .||:.:  ||.  ||....::|:   |:|...||........:...|.|.|..:|..:.
  Fly   599 SARRSGEVTVIV--PPK--LSPFQTNILQLNMGDRASLTCSVVKGDLPLTINWRKDGRPIDPTQH 659

Zfish   274 S------------VFETT-ADHSFFTEPVSCLVFNAVGSTNVSILVDVHFGPILVVEPRPVTVDV 325
            .            |.|.. :||   |...||:|.|:......|..:.|:..|..:|||....|:.
  Fly   660 MSVKQVDQYNSILVIENLGSDH---TGNYSCVVRNSAAEVENSQALLVNVPPRWIVEPVDANVER 721

Zfish   326 DSDVTLNCKWSGNPPLTLTWTKKGSS--------------MVLSNSNQLFLKSVSQADAGQYVCK 376
            :..:.|:|:..|.|..::.|.|...|              .:|.|.: |.|:.|.:...|.|:|:
  Fly   722 NRHIMLHCQAQGVPTPSIVWKKATGSKSGEYEEVRERPFTKLLGNGS-LLLQHVKEDREGFYLCQ 785

Zfish   377 AIVPRIGVGE---TEVTLTVNGPPIISSEPIQYAV-RGEKGEIKCYIASTPPPDKIVWAWKENVW 437
            |   ..|:|.   ..:.|.||..|..||......| :|:...::|.: |...|..|||      .
  Fly   786 A---NNGIGTGIGKVIQLKVNSSPYFSSTSRSVMVKKGDTALLQCAV-SGDKPINIVW------M 840

Zfish   438 EKERGTL--LERYTVEQSRPATQGGAVLSTLTINNVMEADFQSTYNCTAWNAFGPGTMIITLEET 500
            ...:.||  ...|.:...:.||..| |.:.|.|..| :|.....|.|.|.|.:|....::.|:  
  Fly   841 RSGKNTLNPSTNYKISVKQEATPDG-VSAELQIRTV-DATDSGPYFCRASNLYGNDQQLVQLQ-- 901

Zfish   501 DIASEDIVPVGVIAGGSVGSSILLLLLLFALIFYLYRQRKSSRRGVTLKPDIKVETVNKETNLEE 565
              ..|..:|..|:....:.|                       |.|.:|             .:.
  Fly   902 --VQEPPLPPSVLEAAMISS-----------------------RSVNIK-------------WQP 928

Zfish   566 EAASASTATRMV----KAMYSFLPSVSLSPSTQPFKDDMDLKQDLQTETLEPKVEEYEAKDPTN- 625
            :.......|:.:    :|.:|..|::        |.|..               ::.|.|||.: 
  Fly   929 KTLGTGDVTKYIVEFREADHSLPPAL--------FVDQW---------------QQIEVKDPPHF 970

Zfish   626 --GYYNVRATTHDEVR-----SSTRSLLYQEF--------RAPNPASVSASTGGPAN-------- 667
              ...|::..|....|     |:.||...||.        .|..|.|:||.   |.:        
  Fly   971 NAMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGPPLSLSAR---PLSSTELLISW 1032

Zfish   668 IHPAPTGR----------YEARPTSRMAHN---------------------TYAHFNTIARA-SQ 700
            :.|.|..|          |:...:...|:|                     .:|.:..:.:| :|
  Fly  1033 VAPLPELRHGDIQGYNVGYKLSSSGNTAYNFTSVSGDGDGGNGELLLSGLAKFARYTVVVQAFNQ 1097

Zfish   701 IQPPANPVSKTT------DYPAERGLLESTNPLAFDSYAYSTTPQ-------------YRLGFAP 746
            :.|  .|:|:.|      |.|:...  |.....|..|.:...:.|             |:|.|.|
  Fly  1098 VGP--GPLSEPTAAQTMEDVPSRPP--EDVRCAALSSQSLQVSWQPPPIYHTNGLLQGYKLIFEP 1158

Zfish   747 PLE 749
            .::
  Fly  1159 IID 1161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kirrel1bXP_017212964.1 None
Dscam2NP_001261500.1 Ig 51..127 CDD:299845
Ig 138..>203 CDD:299845
I-set 238..327 CDD:254352
Ig 247..327 CDD:299845
I-set 332..418 CDD:254352
IGc2 344..407 CDD:197706
IG_like 432..517 CDD:214653 26/96 (27%)
IGc2 436..507 CDD:197706 21/82 (26%)
I-set 521..610 CDD:254352 30/99 (30%)
IGc2 533..597 CDD:197706 23/74 (31%)
Ig 630..699 CDD:143165 15/71 (21%)
IG_like 714..802 CDD:214653 21/91 (23%)
Ig 725..802 CDD:299845 19/80 (24%)
Ig 823..894 CDD:143165 22/79 (28%)
FN3 906..1006 CDD:238020 24/158 (15%)
FN3 1013..1111 CDD:238020 18/102 (18%)
FN3 1119..1209 CDD:238020 8/45 (18%)
FN3 1219..1313 CDD:238020
Ig 1336..1402 CDD:143165
FN3 1409..1498 CDD:238020
FN3 1515..1588 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.