DRSC/TRiP Functional Genomics Resources

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Protein Alignment PDCD6 and pdcd6

DIOPT Version :10

Sequence 1:NP_037364.1 Gene:PDCD6 / 10016 HGNCID:8765 Length:191 Species:Homo sapiens
Sequence 2:NP_957244.1 Gene:pdcd6 / 393925 ZFINID:ZDB-GENE-040426-1307 Length:185 Species:Danio rerio


Alignment Length:191 Identity:157/191 - (82%)
Similarity:168/191 - (87%) Gaps:9/191 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     3 AY--SYRPGPGAGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTV 65
            ||  .|||       |...:|.|||.||||:||||||||||.|||||||||||||||||||||||
Zfish     2 AYHNQYRP-------PHYNSAPPDQGFLWNIFQRVDKDRSGAISDTELQQALSNGTWTPFNPVTV 59

Human    66 RSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQF 130
            ||||||||||||.||||:||.|||||||||||:||||||||||.||||||||||:||||||||||
Zfish    60 RSIISMFDRENKGGVNFNEFAGVWKYITDWQNIFRTYDRDNSGFIDKNELKQALTGFGYRLSDQF 124

Human   131 HDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV 191
            ::.||.|||||.|||:|||||||.|||||||||:||||||||||||||||||||||||::|
Zfish   125 YNTLIEKFDRQKRGQVAFDDFIQCCIVLQRLTDVFRRYDTDQDGWIQVSYEQYLSMVFNVV 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDCD6NP_037364.1 EFh_PEF_ALG-2 27..191 CDD:320058 146/163 (90%)
EF-hand motif 27..56 CDD:320058 26/28 (93%)
EF-hand motif 64..93 CDD:320058 25/28 (89%)
EF-hand motif 94..124 CDD:320058 26/29 (90%)
EF-hand motif 130..159 CDD:320058 21/28 (75%)
EF-hand motif 160..191 CDD:320058 28/30 (93%)
pdcd6NP_957244.1 EFh_PEF_ALG-2 21..185 CDD:320058 146/163 (90%)
EF-hand motif 21..50 CDD:320058 26/28 (93%)
EF-hand motif 58..87 CDD:320058 25/28 (89%)
EF-hand motif 88..118 CDD:320058 26/29 (90%)
EF-hand motif 124..153 CDD:320058 21/28 (75%)
EF-hand motif 154..185 CDD:320058 28/30 (93%)

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