DRSC/TRiP Functional Genomics Resources

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Protein Alignment PDCD6 and Pdcd6

DIOPT Version :9

Sequence 1:NP_037364.1 Gene:PDCD6 / 10016 HGNCID:8765 Length:191 Species:Homo sapiens
Sequence 2:NP_035181.1 Gene:Pdcd6 / 18570 MGIID:109283 Length:191 Species:Mus musculus


Alignment Length:191 Identity:189/191 - (98%)
Similarity:189/191 - (98%) Gaps:0/191 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAAYSYRPGPGAGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTV 65
            |||||||||||.|||||||||||||||||||||||||||||||||.|||||||||||||||||||
Mouse     1 MAAYSYRPGPGGGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTV 65

Human    66 RSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQF 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse    66 RSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQF 130

Human   131 HDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV 191
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   131 HDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDCD6NP_037364.1 EFh_PEF_ALG-2 27..191 CDD:320058 162/163 (99%)
Pdcd6NP_035181.1 EFh_PEF_ALG-2 27..191 CDD:320058 162/163 (99%)
EF-hand motif 27..56 CDD:320058 27/28 (96%)
EF-hand motif 64..93 CDD:320058 28/28 (100%)
EF-hand motif 94..123 CDD:320058 28/28 (100%)
EF-hand motif 130..159 CDD:320058 28/28 (100%)
EF-hand motif 161..189 CDD:320058 27/27 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83964634
Domainoid 1 1.000 128 1.000 Domainoid score I38717
eggNOG 1 0.900 - - E1_KOG0037
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7880
Inparanoid 1 1.050 393 1.000 Inparanoid score I13791
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG54126
OrthoDB 1 1.010 - - D1330600at2759
OrthoFinder 1 1.000 - - FOG0000697
OrthoInspector 1 1.000 - - oto112372
orthoMCL 1 0.900 - - OOG6_100410
Panther 1 1.100 - - LDO PTHR23064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4200
SonicParanoid 1 1.000 - - X1327
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1818.300

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